Factsheet for TraesCS5D01G487100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G112530.1	Barley	extracellular	66.07	98.3
TraesCS5B01G487400.1	Wheat	cytosol	98.37	98.05
HORVU0Hr1G014070.1	Barley	cytosol, plasma membrane, plastid	85.48	95.1
TraesCS5A01G474300.1	Wheat	cytosol	92.01	92.01
Zm00001d034630_P001	Maize	extracellular	84.5	84.78
EER93198	Sorghum	cytosol	84.34	84.62
Os03t0819100-01	Rice	cytosol, plasma membrane, plastid	84.18	84.45
CDX91114	Canola	cytosol	38.83	68.99
KRG93029	Soybean	nucleus	66.23	66.56
GSMUA_Achr4P16860_001	Banana	cytosol	59.22	65.88
VIT_13s0067g03300.t01	Wine grape	cytosol	65.25	65.47
Solyc04g049720.2.1	Tomato	cytosol	55.14	62.13
PGSC0003DMT400074587	Potato	cytosol	61.99	62.09
Bra008823.1-P	Field mustard	cytosol	61.99	61.89
CDX69635	Canola	cytosol	61.99	61.89
CDY09805	Canola	cytosol	61.83	61.73
Bra023419.1-P	Field mustard	cytosol	61.34	61.44
CDX85643	Canola	cytosol	61.17	61.27
AT5G13520.1	Thale cress	cytosol	60.36	60.06
TraesCS5D01G083200.1	Wheat	plasma membrane	15.99	12.65
TraesCS1D01G442200.1	Wheat	plasma membrane	14.36	11.43
TraesCS6D01G171800.1	Wheat	golgi, unclear	15.66	10.95
TraesCS4D01G017700.2	Wheat	golgi	15.33	10.79
TraesCS5D01G196500.1	Wheat	plasma membrane	15.5	10.34
TraesCS5D01G196600.1	Wheat	plasma membrane	15.33	10.18

Protein Annotations

KEGG:00590+3.3.2.6	Gene3D:1.10.1740.60	Gene3D:1.10.390.10	Gene3D:1.25.40.320	MapMan:19.4.5.6.5	Gene3D:2.60.40.1730
InterPro:ARM-type_fold	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008237	GO:GO:0008270	GO:GO:0016787	GO:GO:0019538	InterPro:IPR027268	InterPro:IPR038502
InterPro:M1_LTA-4_hydro/amino_C_sf	PFAM:PF01433	PFAM:PF09127	PRINTS:PR00756	PANTHER:PTHR11533	PANTHER:PTHR11533:SF174
InterPro:Peptidase_M1	InterPro:Peptidase_M1_C	InterPro:Peptidase_M1_N	InterPro:Peptidase_M4/M1_CTD_sf	SMART:SM01263	SUPFAM:SSF48371
SUPFAM:SSF55486	SUPFAM:SSF63737	EnsemblPlantsGene:TraesCS5D01G487100	EnsemblPlants:TraesCS5D01G487100.1	SEG:seg	:

Description

No Description!

Coordinates

chr5D:+:522137918..522141861

Molecular Weight (calculated)

63223.1 Da

IEP (calculated)

4.847

GRAVY (calculated)

-0.178

Length

613 amino acids

Sequence
(BLAST)

001: MAPVDPHSYT DGAHPVTAHA ALAFYLDFAA STIHASXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XPVLGTALTL ALPPDTASFL
101: LTFSTSPAAS ALQWLAPPQT ASGLPFVFSQ CQSIHARSVF PCHDTPAARI TYSLLLNVPA QLSAVAAARH VARRDPVPSD HRGACDDALW CAPGRIVEEF
201: EMAQCVPPYL FAFAAGGIGS RDLGPRTRVY AEGGDTLLDD AAREFAGVED MVKVGESLFG PYEWERFDLL VLPPSFPYGG MENPRMVFLT PTVIKGDAAG
301: AQVVAHELAH SWTGNLITNK TNEDFWLNEG FTTYAERRIV EVVQGEERAA LNSGIGWRGL NRMMERFKDN MEFTKLKPKM AGIDPDDVYS EVPYEKGFQF
401: LWRIERQIGR PAFDEFLKKY IANFKFQSID TETFLEFLRA NVPGIENQVD LHEWINGTGL PPDAMEPESA TYKKICVLAA EFKSGKIPSE EEVADWSGQE
501: WELYLENLPT DVEASQVTAL DERYKLSESR DYEVKVAFLQ LAIPTGCRCY FNEVEKCLKQ VGRMKYLRPL YSSLARCSGE EEKMLAKRIF SEAQEFYHPI
601: ARGVAESILL KHG

Best Arabidopsis Sequence Match ( AT5G13520.1 )
(BLAST)

001: MAPIDPHSFT DSSHPLTTHV ALSLYLDFNT SIIHGSALLT LSSAFSGELS LDTRCISIAM VLDPLTLEPI PYSVSTTPDR IRGTEVVVVL SGQSSLLIVY
101: STSPSASALQ WLSPLQTFSK LHPYVYTQCQ AIHARSIFPC QDTPAARIRY DVVMNIPNSL SAVMSARHVR RRLAVPEEAK HLEAGSLGSS LWCGEDRVVE
201: EFAMEQPIPP YLFAFAVGEL GFREVGPRTR VYTESAAIEV LDAAALEFAG TEDMIKQGEK LFGDYEWERF DLLVLPPSFP YGGMENPRMV FLTPTVIKGD
301: ATGAQVVAHE LAHSWTGNLI TNINNEHFWL NEGFTTYAER RIVEVVQGAD IATLNIGIGW RGLTDEMERF KDNLECTKLW NKQEGVDPDD VYSQVPYEKG
401: FQFVLRIERQ IGRTAFDEFL KKYIATFKFK SIDTNTFLEF LKANIPGIEK EINLQLWTEG VGIPEDAYEP VSTIYTKIIS LAKEFKEGKM PSEDDVAEWN
501: GQEWELYLEN LPKSCEPSQV MALDKRYRLA ESKDYEVKVS FLQLAVTSKC REYHGEVKKT LKEVGRMKYL RPLFTALAQS GGTEEKQLAK QVFAEARETY
601: HPIAQGVVES ILSKYI

Arabidopsis Description

LKHA4Leukotriene A-4 hydrolase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FY49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.