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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX91114 Canola cytosol 50.32 89.86
Bra008823.1-P Field mustard cytosol 84.25 84.53
CDX69635 Canola cytosol 84.25 84.53
CDY09805 Canola cytosol 83.77 84.04
CDX85643 Canola cytosol 82.14 82.68
Bra023419.1-P Field mustard cytosol 81.98 82.52
HORVU5Hr1G112530.1 Barley extracellular 48.54 72.57
VIT_13s0067g03300.t01 Wine grape cytosol 69.32 69.89
KRG93029 Soybean nucleus 66.23 66.89
Solyc04g049720.2.1 Tomato cytosol 57.95 65.62
PGSC0003DMT400074587 Potato cytosol 64.94 65.36
GSMUA_Achr4P16860_001 Banana cytosol 57.63 64.43
HORVU0Hr1G014070.1 Barley cytosol, plasma membrane, plastid 57.31 64.07
Os03t0819100-01 Rice cytosol, plasma membrane, plastid 63.47 63.99
EER93198 Sorghum cytosol 62.34 62.85
Zm00001d034630_P001 Maize extracellular 62.01 62.52
TraesCS5A01G474300.1 Wheat cytosol 62.18 62.48
TraesCS5D01G487100.1 Wheat cytosol 60.06 60.36
TraesCS5B01G487400.1 Wheat cytosol 60.23 60.33
Zm00001d017093_P001 Maize cytosol 19.81 34.08
Zm00001d006252_P001 Maize peroxisome 19.64 33.61
Zm00001d018463_P001 Maize peroxisome 19.48 33.33
Zm00001d006253_P001 Maize peroxisome 19.32 33.06
Zm00001d044280_P001 Maize peroxisome 19.32 33.06
AT4G33090.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 15.1 10.58
Protein Annotations
KEGG:00590+3.3.2.6Gene3D:1.10.1740.60Gene3D:1.10.390.10Gene3D:1.25.40.320MapMan:19.4.5.6.5Gene3D:2.60.40.1730
EntrezGene:831196ProteinID:AED91907.1EMBL:AK220991InterPro:ARM-type_foldArrayExpress:AT5G13520EnsemblPlantsGene:AT5G13520
RefSeq:AT5G13520TAIR:AT5G13520RefSeq:AT5G13520-TAIR-GEnsemblPlants:AT5G13520.1TAIR:AT5G13520.1EMBL:AY074335
EMBL:AY133832Unigene:At.32058ProteinID:CAC05429.1GO:GO:0003674GO:GO:0003824GO:GO:0004301
GO:GO:0004463GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005829GO:GO:0006508GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0008233
GO:GO:0008237GO:GO:0008270GO:GO:0009056GO:GO:0009058GO:GO:0009987GO:GO:0016787
GO:GO:0019370GO:GO:0019538GO:GO:0042277GO:GO:0043171GO:GO:0046872GO:GO:0070006
InterPro:IPR027268InterPro:IPR038502MEROPS:M01.A26InterPro:M1_LTA-4_hydro/amino_C_sfInterPro:M1_LTA4HRefSeq:NP_196856.1
PFAM:PF01433PFAM:PF09127PO:PO:0000013PO:PO:0000037PO:PO:0000293PO:PO:0001054
PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507PO:PO:0007611PO:PO:0007616
PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009PO:PO:0009010PO:PO:0009025
PO:PO:0009030PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009052PO:PO:0020038
PO:PO:0020100PO:PO:0020137PO:PO:0025022PRINTS:PR00756PANTHER:PTHR11533PANTHER:PTHR11533:SF174
InterPro:Peptidase_M1InterPro:Peptidase_M1_CInterPro:Peptidase_M1_NInterPro:Peptidase_M4/M1_CTD_sfUniProt:Q9FY49SMART:SM01263
SUPFAM:SSF48371SUPFAM:SSF55486SUPFAM:SSF63737UniParc:UPI00000A55B0SEG:seg:
Description
LKHA4Leukotriene A-4 hydrolase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FY49]
Coordinates
chr5:-:4341948..4344792
Molecular Weight (calculated)
69269.7 Da
IEP (calculated)
4.893
GRAVY (calculated)
-0.176
Length
616 amino acids
Sequence
(BLAST)
001: MAPIDPHSFT DSSHPLTTHV ALSLYLDFNT SIIHGSALLT LSSAFSGELS LDTRCISIAM VLDPLTLEPI PYSVSTTPDR IRGTEVVVVL SGQSSLLIVY
101: STSPSASALQ WLSPLQTFSK LHPYVYTQCQ AIHARSIFPC QDTPAARIRY DVVMNIPNSL SAVMSARHVR RRLAVPEEAK HLEAGSLGSS LWCGEDRVVE
201: EFAMEQPIPP YLFAFAVGEL GFREVGPRTR VYTESAAIEV LDAAALEFAG TEDMIKQGEK LFGDYEWERF DLLVLPPSFP YGGMENPRMV FLTPTVIKGD
301: ATGAQVVAHE LAHSWTGNLI TNINNEHFWL NEGFTTYAER RIVEVVQGAD IATLNIGIGW RGLTDEMERF KDNLECTKLW NKQEGVDPDD VYSQVPYEKG
401: FQFVLRIERQ IGRTAFDEFL KKYIATFKFK SIDTNTFLEF LKANIPGIEK EINLQLWTEG VGIPEDAYEP VSTIYTKIIS LAKEFKEGKM PSEDDVAEWN
501: GQEWELYLEN LPKSCEPSQV MALDKRYRLA ESKDYEVKVS FLQLAVTSKC REYHGEVKKT LKEVGRMKYL RPLFTALAQS GGTEEKQLAK QVFAEARETY
601: HPIAQGVVES ILSKYI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.