Factsheet for PGSC0003DMT400074587

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g049720.2.1	Tomato	cytosol	83.82	94.3
VIT_13s0067g03300.t01	Wine grape	cytosol	75.65	75.78
HORVU5Hr1G112530.1	Barley	extracellular	49.02	72.82
CDX91114	Canola	cytosol	40.2	71.3
KRG93029	Soybean	nucleus	69.28	69.51
Bra023419.1-P	Field mustard	cytosol	68.79	68.79
CDX85643	Canola	cytosol	68.63	68.63
Bra008823.1-P	Field mustard	cytosol	68.14	67.92
CDX69635	Canola	cytosol	68.14	67.92
GSMUA_Achr4P16860_001	Banana	cytosol	60.95	67.7
HORVU0Hr1G014070.1	Barley	cytosol, plasma membrane, plastid	60.46	67.15
CDY09805	Canola	cytosol	67.32	67.1
Os03t0819100-01	Rice	cytosol, plasma membrane, plastid	65.85	65.96
EER93198	Sorghum	cytosol	65.03	65.14
Zm00001d034630_P001	Maize	extracellular	65.03	65.14
AT5G13520.1	Thale cress	cytosol	65.36	64.94
TraesCS5A01G474300.1	Wheat	cytosol	64.87	64.76
TraesCS5D01G487100.1	Wheat	cytosol	62.09	61.99
TraesCS5B01G487400.1	Wheat	cytosol	62.09	61.79
Zm00001d017093_P001	Maize	cytosol	20.59	35.2
Zm00001d006252_P001	Maize	peroxisome	20.1	34.17
Zm00001d018463_P001	Maize	peroxisome	20.1	34.17
Zm00001d006253_P001	Maize	peroxisome	19.93	33.89
Zm00001d044280_P001	Maize	peroxisome	19.93	33.89
PGSC0003DMT400021155	Potato	cytosol	16.18	11.31

Protein Annotations

KEGG:00590+3.3.2.6	Gene3D:1.10.1740.60	Gene3D:1.10.390.10	Gene3D:1.25.40.320	EntrezGene:102582016	MapMan:19.4.5.6.5
Gene3D:2.60.40.1730	InterPro:ARM-type_fold	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0008237	GO:GO:0008270	GO:GO:0016787	GO:GO:0019538	InterPro:IPR027268
InterPro:IPR038502	MEROPS:M01.A26	UniProt:M1CTX3	InterPro:M1_LTA-4_hydro/amino_C_sf	InterPro:M1_LTA4H	PFAM:PF01433
PFAM:PF09127	EnsemblPlantsGene:PGSC0003DMG400028998	PGSC:PGSC0003DMG400028998	EnsemblPlants:PGSC0003DMT400074587	PRINTS:PR00756	PANTHER:PTHR11533
PANTHER:PTHR11533:SF174	InterPro:Peptidase_M1	InterPro:Peptidase_M1_C	InterPro:Peptidase_M1_N	InterPro:Peptidase_M4/M1_CTD_sf	SMART:SM01263
SUPFAM:SSF48371	SUPFAM:SSF55486	SUPFAM:SSF63737	UniParc:UPI000294BEA1	RefSeq:XP_006340549.1	SEG:seg

Description

Leukotriene A-4 hydrolase [Source:PGSC_GENE;Acc:PGSC0003DMG400028998]

Coordinates

chr4:+:33061623..33068491

Molecular Weight (calculated)

68803.9 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.187

Length

612 amino acids

Sequence
(BLAST)

001: MAPIDPHSFT DSTHPLTTHI SLTFYFDFPS STISSATLLS FSTPYTGPLT LDTRSLSVSY VLDPLSLSPL PFSLSPTDPI LGQSLNISIS KQTHQILILS
101: KTSPSSSALQ WLSPTQTFNK NHPFLYTHCQ PIHARSIFPC QDTPVARVKY TAKLNIPREL SAVMAARHVE RRDPIPSEAQ GVCEDSVWCG DDRVVEEFVM
201: EQPIPPYLFA FAIGELGFRE VGPRTRVYAE AVPEVLDAAA TEFAGTEEIV MVGERLFGPY EWERFDLLVL PPSFPLGGME NPRLVFLTPT VIKGDASGSQ
301: VVAHELAHGW TGNLITNKNN EHFWLNEGFT TYAERRIVEA VQGEDIASLN IGIGWMGLVK DMEKFKDNME FTKLKTSQAG VDPDDVYSVV PYEKGFQFLQ
401: RIERQIGRPA FDDFLKKYIG TFKFQSIDTD MFLNFLKANV PGIENEIDLK LWTEGTGIPP DAMEPVSNLY SKIVSLANEF KLGRIPREDE VADWKGQEWE
501: LYLENLPKSV EASQVRALDA LYHLSESKNY EVKVAFLQLA ISARCRDYYG VVERTLKEVG RILYLRPLYT ALVQGDRKEE DRAFARRVFS EACDSYHPIA
601: QAVVEATLAK NV

Best Arabidopsis Sequence Match ( AT5G13520.1 )
(BLAST)

001: MAPIDPHSFT DSSHPLTTHV ALSLYLDFNT SIIHGSALLT LSSAFSGELS LDTRCISIAM VLDPLTLEPI PYSVSTTPDR IRGTEVVVVL SGQSSLLIVY
101: STSPSASALQ WLSPLQTFSK LHPYVYTQCQ AIHARSIFPC QDTPAARIRY DVVMNIPNSL SAVMSARHVR RRLAVPEEAK HLEAGSLGSS LWCGEDRVVE
201: EFAMEQPIPP YLFAFAVGEL GFREVGPRTR VYTESAAIEV LDAAALEFAG TEDMIKQGEK LFGDYEWERF DLLVLPPSFP YGGMENPRMV FLTPTVIKGD
301: ATGAQVVAHE LAHSWTGNLI TNINNEHFWL NEGFTTYAER RIVEVVQGAD IATLNIGIGW RGLTDEMERF KDNLECTKLW NKQEGVDPDD VYSQVPYEKG
401: FQFVLRIERQ IGRTAFDEFL KKYIATFKFK SIDTNTFLEF LKANIPGIEK EINLQLWTEG VGIPEDAYEP VSTIYTKIIS LAKEFKEGKM PSEDDVAEWN
501: GQEWELYLEN LPKSCEPSQV MALDKRYRLA ESKDYEVKVS FLQLAVTSKC REYHGEVKKT LKEVGRMKYL RPLFTALAQS GGTEEKQLAK QVFAEARETY
601: HPIAQGVVES ILSKYI

Arabidopsis Description

LKHA4Leukotriene A-4 hydrolase homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9FY49]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.