CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, cytosol

Predictor Summary:

nucleus 1
plastid 1
mitochondrion 3
peroxisome 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03438	Soybean	mitochondrion	50.3	37.05
CDY30725	Canola	mitochondrion	67.88	28.87
CDY66231	Canola	nucleus	24.85	25.62
KRH56945	Soybean	endoplasmic reticulum, plasma membrane	82.42	25.09
Bra029253.1-P	Field mustard	nucleus	24.85	24.55
KRH03440	Soybean	mitochondrion	83.64	24.34
KRH56948	Soybean	mitochondrion	80.0	23.83
Bra010097.1-P	Field mustard	mitochondrion	74.55	22.49
CDY00303	Canola	mitochondrion	74.55	22.49
CDY61347	Canola	mitochondrion	74.55	22.45
VIT_17s0000g05800.t01	Wine grape	mitochondrion	73.94	22.34
AT5G62530.1	Thale cress	mitochondrion	72.73	21.58
Solyc06g071000.2.1	Tomato	plastid	72.12	21.48
EES19875	Sorghum	mitochondrion	70.91	21.31
PGSC0003DMT400083137	Potato	cytosol, extracellular	71.52	21.3
Os05t0536400-01	Rice	mitochondrion	70.3	21.09
TraesCS1A01G357900.1	Wheat	mitochondrion	69.7	20.87
TraesCS1B01G374500.1	Wheat	mitochondrion	69.7	20.87
TraesCS1D01G362700.1	Wheat	extracellular, golgi	69.7	20.87
HORVU1Hr1G080320.1	Barley	mitochondrion	69.09	20.69
GSMUA_AchrUn_...	Banana	mitochondrion	69.09	20.61
Zm00001d038841_P007	Maize	mitochondrion	60.0	17.49
CDY30724	Canola	cytosol	2.42	2.74

Protein Annotations

EMBL:ACUP02012605	EnsemblPlants:KRG90372	EnsemblPlantsGene:GLYMA_20G086900	Gene3D:3.40.605.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_N
InterPro:Aldehyde_DH_dom	InterPro:IPR016162	PANTHER:PTHR43521	PANTHER:PTHR43521:SF2	PFAM:PF00171	ProteinID:KRG90372
ProteinID:KRG90372.1	SUPFAM:SSF53720	UniParc:UPI00029615E4	UniProt:K7N2D3	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr20:-:32387092..32389205

Molecular Weight (calculated)

18579.8 Da

IEP (calculated)

9.818

GRAVY (calculated)

0.109

Length

165 amino acids

Sequence
(BLAST)

001: MFGEISAKAA HMLSLHKVSD FFTRLIQRIS PKSYQQAFGE VYVTQMFLEN LCGDQVRFLV RSFAVPGNHV GQRCHGFRWP YGPVTIITPF NFPLEIPALQ
101: LMGALYMANK PVLKVDSKNW SKTSLLSKLE DLAERRKLAN LTIDSVLTVS IACLLFPPSS NCSRI

Best Arabidopsis Sequence Match ( AT5G62530.1 )
(BLAST)

001: MYRVFASRAL RAKSLCDKSS TSLASLTLSR LNHSIPFATV DAEELSGAHP AEVQSFVQGK WIGSSNHNTL LDPLNGEPFI KVAEVDESGT QPFVDSLSQC
101: PKHGLHNPFK SPERYLLYGD ISTKAAHMLA LPKVADFFAR LIQRVAPKSY QQAAGEVFVT RKFLENFCGD QVRFLARSFA IPGNHLGQQS HGYRWPYGPV
201: TIVTPFNFPL EIPLLQLMGA LYMGNKPLLK VDSKVSIVME QMMRLLHYCG LPAEDVDFIN SDGKTMNKIL LEANPRMTLF TGSSRVAEKL ALDLKGRIRL
301: EDAGFDWKVL GPDVQEVDYV AWQCDQDAYA CSGQKCSAQS MLFVHENWSK TPLVSKLKEL AERRKLEDLT IGPVLTFTTE AMLEHMENLL QIPGSKLLFG
401: GKELKNHSIP SIYGALEPTA VYVPIEEILK DNKTYELVTK EIFGPFQIVT EYKKDQLPLV LEALERMHAH LTAAVVSNDP IFLQEVIGNS VNGTTYAGLR
501: GRTTGAPQNH WFGPAGDPRG AGIGTPEAIK LVWSCHREVI YDYGPVPQGW ELPPST

Arabidopsis Description

ALDH12A1Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.