CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66231	Canola	nucleus	40.18	56.25
Bra029253.1-P	Field mustard	nucleus	39.73	53.29
KRG90372	Soybean	cytosol, golgi, peroxisome	37.05	50.3
KRH56948	Soybean	mitochondrion	92.86	37.55
KRH03440	Soybean	mitochondrion	85.27	33.69
KRH56945	Soybean	endoplasmic reticulum, plasma membrane	79.02	32.66
VIT_17s0000g05800.t01	Wine grape	mitochondrion	72.32	29.67
Bra010097.1-P	Field mustard	mitochondrion	71.88	29.43
CDY00303	Canola	mitochondrion	71.43	29.25
CDY61347	Canola	mitochondrion	71.43	29.2
PGSC0003DMT400083137	Potato	cytosol, extracellular	71.88	29.06
Solyc06g071000.2.1	Tomato	plastid	71.43	28.88
AT5G62530.1	Thale cress	mitochondrion	70.09	28.24
EES19875	Sorghum	mitochondrion	68.3	27.87
CDY30725	Canola	mitochondrion	48.21	27.84
Zm00001d038841_P007	Maize	mitochondrion	67.86	26.86
Os05t0536400-01	Rice	mitochondrion	65.62	26.73
TraesCS1B01G374500.1	Wheat	mitochondrion	65.62	26.68
TraesCS1D01G362700.1	Wheat	extracellular, golgi	65.62	26.68
TraesCS1A01G357900.1	Wheat	mitochondrion	65.18	26.5
HORVU1Hr1G080320.1	Barley	mitochondrion	64.73	26.32
GSMUA_AchrUn_...	Banana	mitochondrion	62.5	25.32
CDY30724	Canola	cytosol	2.23	3.42

Protein Annotations

EMBL:ACUP02010348	EnsemblPlants:KRH03438	EnsemblPlantsGene:GLYMA_17G097700	Gene3D:3.40.605.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_N
InterPro:Aldehyde_DH_dom	InterPro:IPR016162	PANTHER:PTHR43521	PANTHER:PTHR43521:SF2	PFAM:PF00171	ProteinID:KRH03438
ProteinID:KRH03438.1	SUPFAM:SSF53720	UniParc:UPI0006EDA839	UniProt:A0A0R0FAS1	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr17:-:7685599..7690421

Molecular Weight (calculated)

24577.5 Da

IEP (calculated)

9.644

GRAVY (calculated)

-0.063

Length

224 amino acids

Sequence
(BLAST)

001: MFKSLVSRAT KDSISRNHNA IASFAFSRCA HSLSFATVEA EEVSGSRPAE VLHLVQGKWV GSSNWNTIAD PLNGDSFIKV AEVDETGIQP FIKSLSSCPK
101: HGVHNPFKAP ERYLMYGDIS TKAAHMLSLP KVSDFFTKLI QRVSPKSYQQ AFGEVSFGVP GNHLRQQSHG FRWPYGPVAI ITPFNFPLEI AVLQLMGALY
201: MGNKPVLKVD SKASSFGSDF GILL

Best Arabidopsis Sequence Match ( AT5G62530.1 )
(BLAST)

001: MYRVFASRAL RAKSLCDKSS TSLASLTLSR LNHSIPFATV DAEELSGAHP AEVQSFVQGK WIGSSNHNTL LDPLNGEPFI KVAEVDESGT QPFVDSLSQC
101: PKHGLHNPFK SPERYLLYGD ISTKAAHMLA LPKVADFFAR LIQRVAPKSY QQAAGEVFVT RKFLENFCGD QVRFLARSFA IPGNHLGQQS HGYRWPYGPV
201: TIVTPFNFPL EIPLLQLMGA LYMGNKPLLK VDSKVSIVME QMMRLLHYCG LPAEDVDFIN SDGKTMNKIL LEANPRMTLF TGSSRVAEKL ALDLKGRIRL
301: EDAGFDWKVL GPDVQEVDYV AWQCDQDAYA CSGQKCSAQS MLFVHENWSK TPLVSKLKEL AERRKLEDLT IGPVLTFTTE AMLEHMENLL QIPGSKLLFG
401: GKELKNHSIP SIYGALEPTA VYVPIEEILK DNKTYELVTK EIFGPFQIVT EYKKDQLPLV LEALERMHAH LTAAVVSNDP IFLQEVIGNS VNGTTYAGLR
501: GRTTGAPQNH WFGPAGDPRG AGIGTPEAIK LVWSCHREVI YDYGPVPQGW ELPPST

Arabidopsis Description

ALDH12A1Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.