CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038841_P007	Maize	mitochondrion	91.99	89.22
TraesCS1D01G362700.1	Wheat	extracellular, golgi	89.25	88.93
TraesCS1B01G374500.1	Wheat	mitochondrion	88.89	88.57
HORVU1Hr1G080320.1	Barley	mitochondrion	88.71	88.38
Os05t0536400-01	Rice	mitochondrion	88.52	88.36
TraesCS1A01G357900.1	Wheat	mitochondrion	88.52	88.2
CDY30724	Canola	cytosol	20.95	78.77
Solyc06g071000.2.1	Tomato	plastid	78.32	77.62
KRH56945	Soybean	endoplasmic reticulum, plasma membrane	76.5	77.49
PGSC0003DMT400083137	Potato	cytosol, extracellular	78.14	77.44
KRH56948	Soybean	mitochondrion	77.96	77.26
VIT_17s0000g05800.t01	Wine grape	mitochondrion	76.68	77.11
GSMUA_AchrUn_...	Banana	mitochondrion	76.32	75.77
KRH03440	Soybean	mitochondrion	78.14	75.66
AT5G62530.1	Thale cress	mitochondrion	76.32	75.36
Bra010097.1-P	Field mustard	mitochondrion	74.86	75.14
CDY00303	Canola	mitochondrion	74.86	75.14
CDY61347	Canola	mitochondrion	74.86	75.0
KRG90372	Soybean	cytosol, golgi, peroxisome	21.31	70.91
KRH03438	Soybean	mitochondrion	27.87	68.3
CDY66231	Canola	nucleus	17.67	60.62
CDY30725	Canola	mitochondrion	41.53	58.76
Bra029253.1-P	Field mustard	nucleus	17.49	57.48

Protein Annotations

Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.3.2	EntrezGene:8068986	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C
InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	UniProt:C5YUI9	EnsemblPlants:EES19875	ProteinID:EES19875
ProteinID:EES19875.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003842	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009507	GO:GO:0009536	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0010133	GO:GO:0016491	GO:GO:0016620	GO:GO:0050897
GO:GO:0055114	GO:GO:0072593	InterPro:IPR016162	InterPro:IPR016163	PFAM:PF00171	ScanProsite:PS00070
PANTHER:PTHR43521	PANTHER:PTHR43521:SF2	EnsemblPlantsGene:SORBI_3009G212600	SUPFAM:SSF53720	unigene:Sbi.3419	UniParc:UPI0001A89172
RefSeq:XP_002441445.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:55816131..55822788

Molecular Weight (calculated)

60584.1 Da

IEP (calculated)

7.341

GRAVY (calculated)

-0.111

Length

549 amino acids

Sequence
(BLAST)

001: MSRLLSRRQI DAVRRSAPLA CVSRWLHTPS FATVSPHEVS GSSPAEVQNF VQGSWTASAN WNWIVDPLNG DQFIKVAEVQ GTEIKPFVES LSKCPKHGLH
101: NPLKAPERYL MYGDISAKAA HMLGQPAVSD FFAKLIQRVS PKSYQQALAE VQVSQKFLEN FCGDQVRFLA RSFAVPGNHL GQRSNGYRWP YGPVAIITPF
201: NFPLEIPLLQ VMGALYMGNK PVLKVDSKVS IVMEQMIRLL HDCGLPAEDM DFINSDGVTM NKLLLEANPK MTLFTGSSRV AEKLAADLKG RVKLEDAGFD
301: WKILGPDVQE VDYVAWVCDQ DAYACSGQKC SAQSVLFMHK NWSSSGLLEK MKKLSERRKL EDLTIGPVLT VTTEAMIEHM NNLLKIQGSK VLFGGEPLAN
401: HSIPKIYGAM KPTAVFVPLE EILKSGNFEL VTKEIFGPFQ VVTEYSEDQL ELVLEACERM NAHLTAAVVS NDPLFLQDVL GRSVNGTTYA GIRARTTGAP
501: QNHWFGPAGD PRGAGIGTPE AIKLVWSCHR EIIYDVGPVP KSWALPSAT

Best Arabidopsis Sequence Match ( AT5G62530.1 )
(BLAST)

001: MYRVFASRAL RAKSLCDKSS TSLASLTLSR LNHSIPFATV DAEELSGAHP AEVQSFVQGK WIGSSNHNTL LDPLNGEPFI KVAEVDESGT QPFVDSLSQC
101: PKHGLHNPFK SPERYLLYGD ISTKAAHMLA LPKVADFFAR LIQRVAPKSY QQAAGEVFVT RKFLENFCGD QVRFLARSFA IPGNHLGQQS HGYRWPYGPV
201: TIVTPFNFPL EIPLLQLMGA LYMGNKPLLK VDSKVSIVME QMMRLLHYCG LPAEDVDFIN SDGKTMNKIL LEANPRMTLF TGSSRVAEKL ALDLKGRIRL
301: EDAGFDWKVL GPDVQEVDYV AWQCDQDAYA CSGQKCSAQS MLFVHENWSK TPLVSKLKEL AERRKLEDLT IGPVLTFTTE AMLEHMENLL QIPGSKLLFG
401: GKELKNHSIP SIYGALEPTA VYVPIEEILK DNKTYELVTK EIFGPFQIVT EYKKDQLPLV LEALERMHAH LTAAVVSNDP IFLQEVIGNS VNGTTYAGLR
501: GRTTGAPQNH WFGPAGDPRG AGIGTPEAIK LVWSCHREVI YDYGPVPQGW ELPPST

Arabidopsis Description

ALDH12A1Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.