CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra029253.1-P	Field mustard	nucleus	99.38	95.21
KRH03438	Soybean	mitochondrion	56.25	40.18
KRG90372	Soybean	cytosol, golgi, peroxisome	25.62	24.85
CDY00303	Canola	mitochondrion	81.25	23.77
CDY61347	Canola	mitochondrion	81.25	23.72
CDY30725	Canola	mitochondrion	56.25	23.2
AT5G62530.1	Thale cress	mitochondrion	78.75	22.66
VIT_17s0000g05800.t01	Wine grape	mitochondrion	67.5	19.78
KRH56945	Soybean	endoplasmic reticulum, plasma membrane	65.62	19.37
KRH56948	Soybean	mitochondrion	66.25	19.13
KRH03440	Soybean	mitochondrion	65.0	18.34
PGSC0003DMT400083137	Potato	cytosol, extracellular	63.12	18.23
Solyc06g071000.2.1	Tomato	plastid	63.12	18.23
EES19875	Sorghum	mitochondrion	60.62	17.67
Os05t0536400-01	Rice	mitochondrion	60.0	17.45
TraesCS1A01G357900.1	Wheat	mitochondrion	60.0	17.42
TraesCS1B01G374500.1	Wheat	mitochondrion	60.0	17.42
TraesCS1D01G362700.1	Wheat	extracellular, golgi	60.0	17.42
HORVU1Hr1G080320.1	Barley	mitochondrion	59.38	17.24
Zm00001d038841_P007	Maize	mitochondrion	60.0	16.96
GSMUA_AchrUn_...	Banana	mitochondrion	56.88	16.46
CDY30724	Canola	cytosol	0.62	0.68

Protein Annotations

EnsemblPlants:CDY66231	EnsemblPlantsGene:GSBRNA2T00052343001	Gene3D:3.40.605.10	GO:A0A078JK89	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_N
InterPro:IPR016162	PANTHER:PTHR43521	PANTHER:PTHR43521:SF2	ProteinID:CDY66231	ProteinID:CDY66231.1	SUPFAM:SSF53720
UniParc:UPI0004EE0253	UniProt:A0A078JK89	MapMan:35.1	:	:	:

Description

BnaAnng21870DBnaAnng21870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JK89]

Coordinates

chrLK035154:-:15182..16326

Molecular Weight (calculated)

17951.4 Da

IEP (calculated)

6.665

GRAVY (calculated)

-0.241

Length

160 amino acids

Sequence
(BLAST)

001: MSHDEKRLIS SLLDLNNVQI FDEVISGAHP AEVQSFVQGK WIGSSNYNTL LDPLNGEPFI KVSEVDESGV QPFVESLSQC PKHGLHNPFK SPERYLLYCD
101: ISTKAAHMLA LPKVSDFFTR LIQRVAPKSY QQAAGEVFVT RKFLDNFCGD QVMQCSKKSV

Best Arabidopsis Sequence Match ( AT5G62530.1 )
(BLAST)

001: MYRVFASRAL RAKSLCDKSS TSLASLTLSR LNHSIPFATV DAEELSGAHP AEVQSFVQGK WIGSSNHNTL LDPLNGEPFI KVAEVDESGT QPFVDSLSQC
101: PKHGLHNPFK SPERYLLYGD ISTKAAHMLA LPKVADFFAR LIQRVAPKSY QQAAGEVFVT RKFLENFCGD QVRFLARSFA IPGNHLGQQS HGYRWPYGPV
201: TIVTPFNFPL EIPLLQLMGA LYMGNKPLLK VDSKVSIVME QMMRLLHYCG LPAEDVDFIN SDGKTMNKIL LEANPRMTLF TGSSRVAEKL ALDLKGRIRL
301: EDAGFDWKVL GPDVQEVDYV AWQCDQDAYA CSGQKCSAQS MLFVHENWSK TPLVSKLKEL AERRKLEDLT IGPVLTFTTE AMLEHMENLL QIPGSKLLFG
401: GKELKNHSIP SIYGALEPTA VYVPIEEILK DNKTYELVTK EIFGPFQIVT EYKKDQLPLV LEALERMHAH LTAAVVSNDP IFLQEVIGNS VNGTTYAGLR
501: GRTTGAPQNH WFGPAGDPRG AGIGTPEAIK LVWSCHREVI YDYGPVPQGW ELPPST

Arabidopsis Description

ALDH12A1Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.