CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56945	Soybean	endoplasmic reticulum, plasma membrane	88.71	92.8
KRH56948	Soybean	mitochondrion	89.59	91.7
KRH03438	Soybean	mitochondrion	33.69	85.27
KRG90372	Soybean	cytosol, golgi, peroxisome	24.34	83.64
VIT_17s0000g05800.t01	Wine grape	mitochondrion	79.54	82.6
Bra010097.1-P	Field mustard	mitochondrion	76.54	79.34
CDY00303	Canola	mitochondrion	76.37	79.16
CDY61347	Canola	mitochondrion	76.37	79.01
AT5G62530.1	Thale cress	mitochondrion	77.25	78.78
Solyc06g071000.2.1	Tomato	plastid	76.72	78.52
PGSC0003DMT400083137	Potato	cytosol, extracellular	76.54	78.34
EES19875	Sorghum	mitochondrion	75.66	78.14
CDY30724	Canola	cytosol	20.11	78.08
Os05t0536400-01	Rice	mitochondrion	74.43	76.73
TraesCS1B01G374500.1	Wheat	mitochondrion	74.43	76.59
TraesCS1D01G362700.1	Wheat	extracellular, golgi	74.43	76.59
TraesCS1A01G357900.1	Wheat	mitochondrion	74.25	76.41
HORVU1Hr1G080320.1	Barley	mitochondrion	74.07	76.22
GSMUA_AchrUn_...	Banana	mitochondrion	73.9	75.77
Zm00001d038841_P007	Maize	mitochondrion	71.43	71.55
CDY66231	Canola	nucleus	18.34	65.0
CDY30725	Canola	mitochondrion	43.21	63.14
Bra029253.1-P	Field mustard	nucleus	18.17	61.68

Protein Annotations

EntrezGene:100806579	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.3.2	UniProt:A0A0R0FAJ6	EMBL:ACUP02010348
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:GLYMA_17G097800
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlants:KRH03440	ProteinID:KRH03440	ProteinID:KRH03440.1
PFAM:PF00171	ScanProsite:PS00070	PANTHER:PTHR43521	PANTHER:PTHR43521:SF2	SUPFAM:SSF53720	UniParc:UPI0006ED7C31
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:7692191..7700018

Molecular Weight (calculated)

62685.7 Da

IEP (calculated)

6.986

GRAVY (calculated)

-0.028

Length

567 amino acids

Sequence
(BLAST)

001: MFKLLVSRAA RVSTPHNHNA FASFAFSRYA HSLPFATVEA EEISGSRAAE VLNLVQGKWV GSSNWNTVVD PLNGDSFIKV AEVDETGIQP FVESLSSCPK
101: HGAHNPFKAP ESLLGVNGMV VLILFRYLMF GEISAKAAHM LSLPKVLDFF TRLIQRVSPK SYQQAFGEVY VTQKFLENFC GDQVRFLARS FAVPGNHLGQ
201: QSHGFRWPYG PVAIITPFNF PLEIPVLQLM GALYMGNKPV LKVDSKVSIV MEQMLRLLHT CGLPLEDVDF INSDGKTMNK LLLEGNPRMT LFTGSSRVAE
301: KLAVDLKGRV KLEDAGFDWK ILGPDVHQED YVAWVCDQDA YACSGQKCSA QSLLFMHENW SKTSLLSKLK DLAERRKLAD LTIGPVLTVT TDSMLEHVNK
401: LLEIPGSKLL FGGSPLENHS IPPIYGAIKP TAVYVPLEEI MKDKNFELVT KEIFGPFQVI TDYQNSQLAV VLDALERMHN HLTAAVVSND PLFLQEVIGK
501: SVNGTTYAGL RARTTGAPQN HWFGPAGDAR GAGIGTPEAI KLVWSCHREI IYDFGPVPKN WEVPPST

Best Arabidopsis Sequence Match ( AT5G62530.1 )
(BLAST)

001: MYRVFASRAL RAKSLCDKSS TSLASLTLSR LNHSIPFATV DAEELSGAHP AEVQSFVQGK WIGSSNHNTL LDPLNGEPFI KVAEVDESGT QPFVDSLSQC
101: PKHGLHNPFK SPERYLLYGD ISTKAAHMLA LPKVADFFAR LIQRVAPKSY QQAAGEVFVT RKFLENFCGD QVRFLARSFA IPGNHLGQQS HGYRWPYGPV
201: TIVTPFNFPL EIPLLQLMGA LYMGNKPLLK VDSKVSIVME QMMRLLHYCG LPAEDVDFIN SDGKTMNKIL LEANPRMTLF TGSSRVAEKL ALDLKGRIRL
301: EDAGFDWKVL GPDVQEVDYV AWQCDQDAYA CSGQKCSAQS MLFVHENWSK TPLVSKLKEL AERRKLEDLT IGPVLTFTTE AMLEHMENLL QIPGSKLLFG
401: GKELKNHSIP SIYGALEPTA VYVPIEEILK DNKTYELVTK EIFGPFQIVT EYKKDQLPLV LEALERMHAH LTAAVVSNDP IFLQEVIGNS VNGTTYAGLR
501: GRTTGAPQNH WFGPAGDPRG AGIGTPEAIK LVWSCHREVI YDYGPVPQGW ELPPST

Arabidopsis Description

ALDH12A1Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.