CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00303	Canola	mitochondrion	95.89	25.59
CDY61347	Canola	mitochondrion	95.21	25.36
Solyc06g071000.2.1	Tomato	plastid	80.82	21.3
PGSC0003DMT400083137	Potato	cytosol, extracellular	80.82	21.3
VIT_17s0000g05800.t01	Wine grape	mitochondrion	78.77	21.06
EES19875	Sorghum	mitochondrion	78.77	20.95
KRH56945	Soybean	endoplasmic reticulum, plasma membrane	77.4	20.85
TraesCS1D01G362700.1	Wheat	extracellular, golgi	77.4	20.51
TraesCS1B01G374500.1	Wheat	mitochondrion	76.71	20.33
KRH56948	Soybean	mitochondrion	76.71	20.22
TraesCS1A01G357900.1	Wheat	mitochondrion	76.03	20.15
KRH03440	Soybean	mitochondrion	78.08	20.11
Zm00001d038841_P007	Maize	mitochondrion	77.4	19.96
HORVU1Hr1G080320.1	Barley	mitochondrion	75.34	19.96
Os05t0536400-01	Rice	mitochondrion	74.66	19.82
GSMUA_AchrUn_...	Banana	mitochondrion	74.66	19.71
CDY30725	Canola	mitochondrion	10.96	4.12
KRG90372	Soybean	cytosol, golgi, peroxisome	2.74	2.42
KRH03438	Soybean	mitochondrion	3.42	2.23
CDY66231	Canola	nucleus	0.68	0.62

Protein Annotations

EnsemblPlants:CDY30724	EnsemblPlantsGene:GSBRNA2T00046072001	PANTHER:PTHR43521	PANTHER:PTHR43521:SF2	ProteinID:CDY30724	ProteinID:CDY30724.1
UniParc:UPI0004EABE23	UniProt:A0A078GZV3	MapMan:35.1	:	:	:

Description

BnaA02g33460DBnaA02g33460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GZV3]

Coordinates

chrLK032258:-:321763..322416

Molecular Weight (calculated)

15995.1 Da

IEP (calculated)

6.253

GRAVY (calculated)

-0.286

Length

146 amino acids

Sequence
(BLAST)

001: MENLLQIQGS KLLFGGKPLK NHSIPSVYGA LEPTAVYVPI EEILKDSKNY ELVTKEIFGP FQIVTEYKKD QLPLEVIGNS VNGTTYAGLR GRTTGAPQNH
101: WFGPAGDPRG AGIGTPEAIK LVWSCHREII YDYGPVPQGW ELPAST

Best Arabidopsis Sequence Match ( AT5G62530.1 )
(BLAST)

001: MYRVFASRAL RAKSLCDKSS TSLASLTLSR LNHSIPFATV DAEELSGAHP AEVQSFVQGK WIGSSNHNTL LDPLNGEPFI KVAEVDESGT QPFVDSLSQC
101: PKHGLHNPFK SPERYLLYGD ISTKAAHMLA LPKVADFFAR LIQRVAPKSY QQAAGEVFVT RKFLENFCGD QVRFLARSFA IPGNHLGQQS HGYRWPYGPV
201: TIVTPFNFPL EIPLLQLMGA LYMGNKPLLK VDSKVSIVME QMMRLLHYCG LPAEDVDFIN SDGKTMNKIL LEANPRMTLF TGSSRVAEKL ALDLKGRIRL
301: EDAGFDWKVL GPDVQEVDYV AWQCDQDAYA CSGQKCSAQS MLFVHENWSK TPLVSKLKEL AERRKLEDLT IGPVLTFTTE AMLEHMENLL QIPGSKLLFG
401: GKELKNHSIP SIYGALEPTA VYVPIEEILK DNKTYELVTK EIFGPFQIVT EYKKDQLPLV LEALERMHAH LTAAVVSNDP IFLQEVIGNS VNGTTYAGLR
501: GRTTGAPQNH WFGPAGDPRG AGIGTPEAIK LVWSCHREVI YDYGPVPQGW ELPPST

Arabidopsis Description

ALDH12A1Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.