CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03440	Soybean	mitochondrion	92.8	88.71
KRH56948	Soybean	mitochondrion	89.48	87.55
KRG90372	Soybean	cytosol, golgi, peroxisome	25.09	82.42
VIT_17s0000g05800.t01	Wine grape	mitochondrion	81.55	80.95
KRH03438	Soybean	mitochondrion	32.66	79.02
Bra010097.1-P	Field mustard	mitochondrion	78.41	77.7
CDY61347	Canola	mitochondrion	78.41	77.55
CDY00303	Canola	mitochondrion	78.23	77.51
CDY30724	Canola	cytosol	20.85	77.4
Solyc06g071000.2.1	Tomato	plastid	78.78	77.08
AT5G62530.1	Thale cress	mitochondrion	78.97	76.98
PGSC0003DMT400083137	Potato	cytosol, extracellular	78.6	76.9
EES19875	Sorghum	mitochondrion	77.49	76.5
Os05t0536400-01	Rice	mitochondrion	77.31	76.18
GSMUA_AchrUn_...	Banana	mitochondrion	76.57	75.05
TraesCS1B01G374500.1	Wheat	mitochondrion	76.2	74.95
TraesCS1D01G362700.1	Wheat	extracellular, golgi	76.01	74.77
TraesCS1A01G357900.1	Wheat	mitochondrion	75.83	74.59
HORVU1Hr1G080320.1	Barley	mitochondrion	75.65	74.41
Zm00001d038841_P007	Maize	mitochondrion	73.43	70.32
CDY66231	Canola	nucleus	19.37	65.62
Bra029253.1-P	Field mustard	nucleus	19.19	62.28
CDY30725	Canola	mitochondrion	44.46	62.11

Protein Annotations

EntrezGene:100794466	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.3.2	UniProt:A0A0R0JQ82	EMBL:ACUP02002803
InterPro:Ald_DH/histidinol_DH	InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	EnsemblPlantsGene:GLYMA_05G029100
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016620
GO:GO:0055114	InterPro:IPR016162	InterPro:IPR016163	EnsemblPlants:KRH56945	ProteinID:KRH56945	ProteinID:KRH56945.1
PFAM:PF00171	ScanProsite:PS00070	PANTHER:PTHR43521	PANTHER:PTHR43521:SF2	SUPFAM:SSF53720	SignalP:SignalP-noTM
UniParc:UPI0002339CC0	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:2501803..2508504

Molecular Weight (calculated)

60099.6 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.047

Length

542 amino acids

Sequence
(BLAST)

001: MCLLRVLSAE FIFTICRFAH SLPFATVQAE EISDSRPAEV LNLVQGKWAG SSNWNTVVDP LNGDSFIKVA EVDETGIQPF VESLSSCPKH GVHNPFKAPE
101: RYLMFGEISA KAAHMLSLPK VSDFFTRLIQ RVSPKSYQQA FGEVYVTQKF LENFCGDQVR FLARSFGVPG NHLGQQSHGF RWPYGPVAII TPFNFPLEIP
201: VLQLMGALYM GNKPVLKVDS KVSIVMDQML RLLHNCGLPL EDVDFINSDG KTMNKLLLEA NPRMTLFTGS SRVAEKLAVD LKGRVKLEDA GFDWKILGPD
301: VLQEDYIAWV CDQDAYACSG QKCSAQSLLF MHENWSKTSL LSKLKDLADR RKLADLTVGP VLTVTTDSML EHINKLLEIP GSKLLFGGQP LEDHSIPPIY
401: GAMKPTAVYV PLEEIMKAKN FELVTREIFG PFQIVTDYKS SQLSVVLDAL ERMHNHLTAA VVSNDPLFLQ EVIGQSVNGT AYAGLRARTT GAPQNHWFGP
501: AGDARGAGIG TPEAIKLVWS CHREIIYDFG PVPKNWEVPP ST

Best Arabidopsis Sequence Match ( AT5G62530.1 )
(BLAST)

001: MYRVFASRAL RAKSLCDKSS TSLASLTLSR LNHSIPFATV DAEELSGAHP AEVQSFVQGK WIGSSNHNTL LDPLNGEPFI KVAEVDESGT QPFVDSLSQC
101: PKHGLHNPFK SPERYLLYGD ISTKAAHMLA LPKVADFFAR LIQRVAPKSY QQAAGEVFVT RKFLENFCGD QVRFLARSFA IPGNHLGQQS HGYRWPYGPV
201: TIVTPFNFPL EIPLLQLMGA LYMGNKPLLK VDSKVSIVME QMMRLLHYCG LPAEDVDFIN SDGKTMNKIL LEANPRMTLF TGSSRVAEKL ALDLKGRIRL
301: EDAGFDWKVL GPDVQEVDYV AWQCDQDAYA CSGQKCSAQS MLFVHENWSK TPLVSKLKEL AERRKLEDLT IGPVLTFTTE AMLEHMENLL QIPGSKLLFG
401: GKELKNHSIP SIYGALEPTA VYVPIEEILK DNKTYELVTK EIFGPFQIVT EYKKDQLPLV LEALERMHAH LTAAVVSNDP IFLQEVIGNS VNGTTYAGLR
501: GRTTGAPQNH WFGPAGDPRG AGIGTPEAIK LVWSCHREVI YDYGPVPQGW ELPPST

Arabidopsis Description

ALDH12A1Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.