Factsheet for Bra029253.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66231	Canola	nucleus	95.21	99.38
KRH03438	Soybean	mitochondrion	53.29	39.73
KRG90372	Soybean	cytosol, golgi, peroxisome	24.55	24.85
Bra010097.1-P	Field mustard	mitochondrion	76.65	23.4
AT5G62530.1	Thale cress	mitochondrion	74.85	22.48
VIT_17s0000g05800.t01	Wine grape	mitochondrion	64.07	19.6
KRH56945	Soybean	endoplasmic reticulum, plasma membrane	62.28	19.19
KRH56948	Soybean	mitochondrion	62.87	18.95
KRH03440	Soybean	mitochondrion	61.68	18.17
PGSC0003DMT400083137	Potato	cytosol, extracellular	59.88	18.05
Solyc06g071000.2.1	Tomato	plastid	59.88	18.05
EES19875	Sorghum	mitochondrion	57.48	17.49
Os05t0536400-01	Rice	mitochondrion	56.89	17.27
TraesCS1A01G357900.1	Wheat	mitochondrion	56.89	17.24
TraesCS1B01G374500.1	Wheat	mitochondrion	56.89	17.24
TraesCS1D01G362700.1	Wheat	extracellular, golgi	56.89	17.24
HORVU1Hr1G080320.1	Barley	mitochondrion	56.29	17.06
Zm00001d038841_P007	Maize	mitochondrion	56.89	16.78
GSMUA_AchrUn_...	Banana	mitochondrion	53.89	16.27

Protein Annotations

EnsemblPlants:Bra029253.1	EnsemblPlants:Bra029253.1-P	EnsemblPlantsGene:Bra029253	Gene3D:3.40.605.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:Ald_DH_N	InterPro:IPR016162
PANTHER:PTHR43521	PANTHER:PTHR43521:SF2	UniParc:UPI0002545DA2	UniProt:M4EKD6	MapMan:35.1	:

Description

AT5G62530 (E=3e-064) ALDH12A1, ATP5CDH, P5CDH | ALDH12A1; 1-pyrroline-5-carboxylate dehydrogenase/ 3-chloroallyl aldehyde dehydrogenase

Coordinates

chrA02:-:26299199..26301776

Molecular Weight (calculated)

18858.5 Da

IEP (calculated)

7.028

GRAVY (calculated)

-0.260

Length

167 amino acids

Sequence
(BLAST)

001: MSHDEKRLIS SLLDLNNVQI FDEVISGAHP AEVQSFVQGK WIGSSNYNTL LDPLNGEPFI KVSEVDESGV QPFVESLSQC PKHGLHIPFK SPERYFKSPE
101: RYLLYCDIST KAAHMLALPK VSDFFTRLIQ RVAPKSYQQA AGEVFVTRKF LDNFCGDQVM QCSKKSV

Best Arabidopsis Sequence Match ( AT5G62530.1 )
(BLAST)

001: MYRVFASRAL RAKSLCDKSS TSLASLTLSR LNHSIPFATV DAEELSGAHP AEVQSFVQGK WIGSSNHNTL LDPLNGEPFI KVAEVDESGT QPFVDSLSQC
101: PKHGLHNPFK SPERYLLYGD ISTKAAHMLA LPKVADFFAR LIQRVAPKSY QQAAGEVFVT RKFLENFCGD QVRFLARSFA IPGNHLGQQS HGYRWPYGPV
201: TIVTPFNFPL EIPLLQLMGA LYMGNKPLLK VDSKVSIVME QMMRLLHYCG LPAEDVDFIN SDGKTMNKIL LEANPRMTLF TGSSRVAEKL ALDLKGRIRL
301: EDAGFDWKVL GPDVQEVDYV AWQCDQDAYA CSGQKCSAQS MLFVHENWSK TPLVSKLKEL AERRKLEDLT IGPVLTFTTE AMLEHMENLL QIPGSKLLFG
401: GKELKNHSIP SIYGALEPTA VYVPIEEILK DNKTYELVTK EIFGPFQIVT EYKKDQLPLV LEALERMHAH LTAAVVSNDP IFLQEVIGNS VNGTTYAGLR
501: GRTTGAPQNH WFGPAGDPRG AGIGTPEAIK LVWSCHREVI YDYGPVPQGW ELPPST

Arabidopsis Description

ALDH12A1Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.