Factsheet for VIT_17s0000g05800.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56945	Soybean	endoplasmic reticulum, plasma membrane	80.95	81.55
KRH56948	Soybean	mitochondrion	81.14	79.96
KRH03440	Soybean	mitochondrion	82.6	79.54
AT5G62530.1	Thale cress	mitochondrion	80.95	79.5
PGSC0003DMT400083137	Potato	cytosol, extracellular	80.59	79.42
Solyc06g071000.2.1	Tomato	plastid	80.4	79.24
Bra010097.1-P	Field mustard	mitochondrion	78.94	78.79
CDY00303	Canola	mitochondrion	78.94	78.79
CDY30724	Canola	cytosol	21.06	78.77
CDY61347	Canola	mitochondrion	78.94	78.65
EES19875	Sorghum	mitochondrion	77.11	76.68
Os05t0536400-01	Rice	mitochondrion	76.74	76.18
TraesCS1A01G357900.1	Wheat	mitochondrion	76.56	75.86
TraesCS1B01G374500.1	Wheat	mitochondrion	76.56	75.86
GSMUA_AchrUn_...	Banana	mitochondrion	76.74	75.77
TraesCS1D01G362700.1	Wheat	extracellular, golgi	76.19	75.5
HORVU1Hr1G080320.1	Barley	mitochondrion	75.82	75.14
KRG90372	Soybean	cytosol, golgi, peroxisome	22.34	73.94
KRH03438	Soybean	mitochondrion	29.67	72.32
Zm00001d038841_P007	Maize	mitochondrion	73.08	70.49
CDY66231	Canola	nucleus	19.78	67.5
Bra029253.1-P	Field mustard	nucleus	19.6	64.07
CDY30725	Canola	mitochondrion	45.42	63.92

Protein Annotations

EntrezGene:100251938	wikigene:100251938	Gene3D:3.40.309.10	Gene3D:3.40.605.10	MapMan:4.2.3.2	InterPro:Ald_DH/histidinol_DH
InterPro:Ald_DH_C	InterPro:Ald_DH_CS_CYS	InterPro:Ald_DH_N	InterPro:Aldehyde_DH_dom	ProteinID:CBI15259	ProteinID:CBI15259.3
UniProt:D7SIE8	EMBL:FN594950	GO:GO:0003674	GO:GO:0003824	GO:GO:0003842	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009507	GO:GO:0009536
GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0010133	GO:GO:0016491	GO:GO:0016620
GO:GO:0050897	GO:GO:0055114	GO:GO:0072593	InterPro:IPR016162	InterPro:IPR016163	EntrezGene:LOC100251938
wikigene:LOC100251938	PFAM:PF00171	ScanProsite:PS00070	PANTHER:PTHR43521	PANTHER:PTHR43521:SF2	SUPFAM:SSF53720
TIGR:TC70153	UniParc:UPI0001BE0B78	ArrayExpress:VIT_17s0000g05800	EnsemblPlantsGene:VIT_17s0000g05800	EnsemblPlants:VIT_17s0000g05800.t01	unigene:Vvi.11471
RefSeq:XP_002273569	RefSeq:XP_002273569.1	:	:	:	:

Description

No Description!

Coordinates

chr17:-:6290204..6305722

Molecular Weight (calculated)

60570.2 Da

IEP (calculated)

6.513

GRAVY (calculated)

-0.116

Length

546 amino acids

Sequence
(BLAST)

001: MRGRVPQIAA LNWLGSLSLS RSIHNLPFAT IEVEEISGSQ PAEVQNLVQG KWTGSTSGET IVDPLNGEPF IQVAEVDETG IQPFVDSLSK CPKHGLHNPF
101: KAPERYLMLG DISNKAAHML SLPKVSDFFT RLIQRVAPKS YQQALGEVYV TQKFLENFSG DQVRFLARSF AVPGNHLGQQ SHGFRWPYGP VAIVTPFNFP
201: LEIPVLQLMG ALYMGNKPIL KVDSKVSIVM EQMIRLLHHC GLPMEDLDFI NSDGKTMNKL LLEANPRMTL FTGSSRVADK LAVDLKGRIK LEDAGFDWKI
301: LGPDVQEVDY VAWVCDQDAY ACSGQKCSAQ SIVFMHENWF KSSLISRMKD LAARRKLEDL TIGPVLSFTT EAMLEHMNKL LQIPGSELLF GGKALENHSI
401: PPIYGALKPT AIYIPLEEML KDGNYELVTR EIFGPFQVVT DYKDNQLPRV LEALERMHAH LTAAVVSNDS LFLQEVIGKS VNGTTYAGLR ARTTGAPQNH
501: WFGPAGDPRG AGIGTPEAIK LVWSCHREII YDIGPLPSHW EIPPAT

Best Arabidopsis Sequence Match ( AT5G62530.1 )
(BLAST)

001: MYRVFASRAL RAKSLCDKSS TSLASLTLSR LNHSIPFATV DAEELSGAHP AEVQSFVQGK WIGSSNHNTL LDPLNGEPFI KVAEVDESGT QPFVDSLSQC
101: PKHGLHNPFK SPERYLLYGD ISTKAAHMLA LPKVADFFAR LIQRVAPKSY QQAAGEVFVT RKFLENFCGD QVRFLARSFA IPGNHLGQQS HGYRWPYGPV
201: TIVTPFNFPL EIPLLQLMGA LYMGNKPLLK VDSKVSIVME QMMRLLHYCG LPAEDVDFIN SDGKTMNKIL LEANPRMTLF TGSSRVAEKL ALDLKGRIRL
301: EDAGFDWKVL GPDVQEVDYV AWQCDQDAYA CSGQKCSAQS MLFVHENWSK TPLVSKLKEL AERRKLEDLT IGPVLTFTTE AMLEHMENLL QIPGSKLLFG
401: GKELKNHSIP SIYGALEPTA VYVPIEEILK DNKTYELVTK EIFGPFQIVT EYKKDQLPLV LEALERMHAH LTAAVVSNDP IFLQEVIGNS VNGTTYAGLR
501: GRTTGAPQNH WFGPAGDPRG AGIGTPEAIK LVWSCHREVI YDYGPVPQGW ELPPST

Arabidopsis Description

ALDH12A1Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q8VZC3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.