Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- mitochondrion 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G15360.1 | KRG93305 | AT3G27960.1 | 21798944 |
| AT3G15360.1 | KRH56614 | AT3G27960.1 | 21798944 |
| AT3G15360.1 | KRH23958 | AT4G25200.1 | 21798944 |
| AT3G15360.1 | KRH39841 | AT4G25200.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH22105 | Soybean | plastid | 92.86 | 92.86 |
| VIT_00s0238g00110.t01 | Wine grape | cytosol | 30.77 | 78.87 |
| KRH55312 | Soybean | nucleus, plastid | 72.53 | 78.11 |
| KRH26086 | Soybean | plastid | 73.63 | 76.57 |
| VIT_19s0014g02890.t01 | Wine grape | plastid | 63.74 | 61.7 |
| Solyc07g063190.2.1 | Tomato | plastid | 60.99 | 60.99 |
| PGSC0003DMT400032333 | Potato | cytosol, extracellular, mitochondrion, plastid | 60.99 | 60.99 |
| HORVU2Hr1G091130.1 | Barley | mitochondrion | 43.41 | 55.63 |
| PGSC0003DMT400039743 | Potato | plastid | 54.4 | 55.31 |
| Solyc12g013810.1.1 | Tomato | plastid | 53.85 | 54.75 |
| PGSC0003DMT400064434 | Potato | plastid | 55.49 | 54.01 |
| Solyc10g006970.2.1 | Tomato | plastid | 54.95 | 53.48 |
| Os02t0639900-01 | Rice | plastid | 50.0 | 52.6 |
| KRH18101 | Soybean | plastid | 26.92 | 51.58 |
| GSMUA_Achr1P00150_001 | Banana | plastid | 52.75 | 51.06 |
| TraesCS2D01G368700.1 | Wheat | plastid | 50.55 | 50.55 |
| Bra001592.1-P | Field mustard | extracellular, plasma membrane | 45.05 | 50.31 |
| TraesCS2A01G372500.1 | Wheat | plastid | 50.55 | 50.0 |
| TraesCS2B01G389500.1 | Wheat | plastid | 50.55 | 49.73 |
| Zm00001d051250_P001 | Maize | plastid | 46.7 | 49.13 |
| GSMUA_Achr11P... | Banana | plastid | 48.9 | 48.9 |
| Zm00001d017379_P001 | Maize | plastid | 46.15 | 48.55 |
| Os04t0530600-01 | Rice | plastid | 47.8 | 48.33 |
| EES07212 | Sorghum | plastid | 46.15 | 48.28 |
| KRH53365 | Soybean | plastid | 47.25 | 47.51 |
| Bra027250.1-P | Field mustard | plastid | 50.0 | 47.4 |
| CDX97662 | Canola | plastid | 50.0 | 47.4 |
| KRH64566 | Soybean | plastid | 46.7 | 46.96 |
| CDX98554 | Canola | plastid | 49.45 | 46.88 |
| Zm00001d002854_P001 | Maize | plastid | 46.7 | 46.7 |
| GSMUA_Achr5P20730_001 | Banana | plastid | 48.35 | 46.32 |
| AT3G15360.1 | Thale cress | plastid | 48.9 | 46.11 |
| EES12552 | Sorghum | plastid | 45.6 | 44.62 |
| CDX82437 | Canola | endoplasmic reticulum | 30.22 | 43.65 |
| CDX75826 | Canola | endoplasmic reticulum | 30.22 | 43.31 |
| HORVU2Hr1G091200.5 | Barley | cytosol | 43.41 | 42.7 |
| GSMUA_Achr5P12100_001 | Banana | plastid | 53.85 | 39.84 |
| GSMUA_Achr4P29990_001 | Banana | plastid | 51.65 | 39.66 |
| KRH15927 | Soybean | plastid | 26.92 | 38.58 |
| KRH50300 | Soybean | plastid | 34.07 | 35.63 |
| KRH70646 | Soybean | plastid | 32.97 | 35.5 |
| KRH36129 | Soybean | plastid | 27.47 | 28.41 |
| KRG90625 | Soybean | plastid | 27.47 | 27.62 |
| KRG91663 | Soybean | plastid | 25.82 | 26.86 |
| KRH35133 | Soybean | plastid | 24.18 | 25.14 |
Protein Annotations
| MapMan:10.5.5 | Gene3D:3.40.30.10 | EMBL:ACUP02007788 | EnsemblPlantsGene:GLYMA_12G223400 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004791 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 |
| GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0016671 |
| GO:GO:0019725 | GO:GO:0034599 | GO:GO:0045454 | GO:GO:0047134 | GO:GO:0055114 | GO:GO:0098869 |
| UniProt:I1LUZ9 | InterPro:IPR013766 | EnsemblPlants:KRH27229 | ProteinID:KRH27229 | ProteinID:KRH27229.1 | PFAM:PF00085 |
| PRINTS:PR00421 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF300 | SUPFAM:SSF52833 | TIGRFAMs:TIGR01068 |
| InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI00023D07AD | : | : |
Description
hypothetical protein
Coordinates
chr12:-:38315695..38319394
Molecular Weight (calculated)
19735.9 Da
IEP (calculated)
9.075
GRAVY (calculated)
-0.017
Length
182 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVQLQSLT LVRSSALPSA TFSPPIALSG RRNSAALPRY ACLRLRPAAE TCFPTRAALR TAPRGGGVKC EAGDTAVEVA PITDANWQSL VLESESPVLV
101: EFWAPWCGPC RMIHPIIDEL AKEYVGRLKC YKLNTDESPS TATRYGIRSI PTVIIFKNGE KKDTVIGAVP KTTLTSSIEK FL
101: EFWAPWCGPC RMIHPIIDEL AKEYVGRLKC YKLNTDESPS TATRYGIRSI PTVIIFKNGE KKDTVIGAVP KTTLTSSIEK FL
001: MASLLDSVTV TRVFSLPIAA SVSSSSAAPS VSRRRISPAR FLEFRGLKSS RSLVTQSASL GANRRTRIAR GGRIACEAQD TTAAAVEVPN LSDSEWQTKV
101: LESDVPVLVE FWAPWCGPCR MIHPIVDQLA KDFAGKFKFY KINTDESPNT ANRYGIRSVP TVIIFKGGEK KDSIIGAVPR ETLEKTIERF LVE
101: LESDVPVLVE FWAPWCGPCR MIHPIVDQLA KDFAGKFKFY KINTDESPNT ANRYGIRSVP TVIIFKGGEK KDSIIGAVPR ETLEKTIERF LVE
Arabidopsis Description
ATHM4TRX-M4 [Source:UniProtKB/TrEMBL;Acc:A0A178VJ83]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.