Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 20.97 | 54.93 |
| HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 20.43 | 53.52 |
| KRH49056 | Soybean | plastid | 72.58 | 48.56 |
| HORVU5Hr1G034090.1 | Barley | mitochondrion | 10.75 | 45.45 |
| HORVU5Hr1G075600.1 | Barley | mitochondrion | 10.75 | 45.45 |
| GSMUA_Achr3P32380_001 | Banana | cytosol | 45.7 | 41.26 |
| HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 30.65 | 41.01 |
| HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 30.65 | 38.26 |
| AT4G29630.1 | Thale cress | cytosol | 40.32 | 33.63 |
| Os06t0611600-00 | Rice | mitochondrion | 37.63 | 33.33 |
| KRH60135 | Soybean | cytosol | 52.15 | 33.11 |
| CDY30209 | Canola | cytosol | 51.08 | 32.76 |
| AT2G19570.1 | Thale cress | cytosol | 51.08 | 31.56 |
| KRH41424 | Soybean | plasma membrane | 46.77 | 31.41 |
| VIT_11s0016g02340.t01 | Wine grape | cytosol | 51.61 | 31.27 |
| Bra024140.1-P | Field mustard | cytosol | 51.08 | 30.94 |
| Bra039004.1-P | Field mustard | cytosol | 47.85 | 30.38 |
| CDY54276 | Canola | cytosol | 51.08 | 30.35 |
| CDY58323 | Canola | cytosol | 47.85 | 30.27 |
| CDY65102 | Canola | cytosol | 47.85 | 30.27 |
| GSMUA_Achr7P24040_001 | Banana | cytosol | 43.55 | 28.52 |
| PGSC0003DMT400020044 | Potato | cytosol | 47.85 | 27.47 |
| Solyc07g021750.1.1 | Tomato | cytosol | 47.31 | 26.99 |
| AT4G29610.1 | Thale cress | cytosol | 41.4 | 26.28 |
| Os01t0712700-01 | Rice | cytosol | 43.01 | 25.64 |
| Zm00001d043674_P001 | Maize | cytosol | 43.55 | 25.63 |
| TraesCS3D01G249300.1 | Wheat | cytosol | 42.47 | 25.48 |
| TraesCS3B01G278200.1 | Wheat | cytosol | 42.47 | 25.48 |
| TraesCS3A01G249300.1 | Wheat | cytosol | 42.47 | 25.48 |
| Zm00001d011710_P001 | Maize | cytosol, extracellular | 41.94 | 25.0 |
| HORVU3Hr1G067290.1 | Barley | cytosol | 41.4 | 24.84 |
| EES03512 | Sorghum | cytosol | 41.94 | 24.68 |
| CDY30210 | Canola | cytosol | 36.56 | 24.37 |
| Bra024141.1-P | Field mustard | cytosol | 36.56 | 24.37 |
| AT4G29600.1 | Thale cress | cytosol | 39.78 | 24.1 |
| CDY54269 | Canola | cytosol | 36.02 | 24.01 |
| CDY54272 | Canola | cytosol | 33.87 | 22.58 |
| AT4G29570.1 | Thale cress | cytosol | 32.8 | 20.82 |
| AT4G29650.1 | Thale cress | cytosol | 26.88 | 19.92 |
| AT4G29620.1 | Thale cress | cytosol | 36.02 | 19.88 |
| CDY54275 | Canola | mitochondrion | 28.49 | 18.53 |
| AT4G29640.1 | Thale cress | cytosol | 31.72 | 17.05 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 32.8 | 15.4 |
| OQU91901 | Sorghum | cytosol, plastid | 21.51 | 13.42 |
| AT4G29580.2 | Thale cress | nucleus | 30.11 | 12.58 |
Protein Annotations
| KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | MapMan:6.2.4.2 | EMBL:ACUP02002605 | InterPro:APOBEC/CMP_deaminase_Zn-bd |
| InterPro:CMP_dCMP_dom | InterPro:Cyd/dCyd_deaminase_Zn-bd | InterPro:Cytidine_deaminase-like | EnsemblPlantsGene:GLYMA_04G154700 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004126 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 |
| GO:GO:0009972 | GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR002125 | UniProt:K7KK60 | EnsemblPlants:KRH63089 |
| ProteinID:KRH63089 | ProteinID:KRH63089.1 | PFAM:PF00383 | PFAM:PF08211 | ScanProsite:PS00903 | PFscan:PS51747 |
| PANTHER:PTHR11644 | PANTHER:PTHR11644:SF2 | MetaCyc:PWY-6556 | MetaCyc:PWY-7181 | MetaCyc:PWY-7193 | MetaCyc:PWY-7199 |
| SUPFAM:SSF53927 | UniParc:UPI000294FEF4 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr4:-:35932441..35934689
Molecular Weight (calculated)
20306.2 Da
IEP (calculated)
6.120
GRAVY (calculated)
0.132
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDDAATTTM IAAAIADGVT IAESQSISKL LPSLVSSAQS LACPSISNFP VAAVELGTSG HIFVGVNMEF PSLPFHHTIH AEQFLLTNMA NNVETHLDSF
101: AVSAAPCGHC RQFLQELRDA PDIQILITSH KNPHFSPLSH FLFHHFGPHD LFPKTVPLLL EPRHNALSLP QNDHFNVLAK EFEILS
101: AVSAAPCGHC RQFLQELRDA PDIQILITSH KNPHFSPLSH FLFHHFGPHD LFPKTVPLLL EPRHNALSLP QNDHFNVLAK EFEILS
001: MDKPSFVIQS KEAESAAKQL GVSVIQLLPS LVKPAQSYAR TPISKFNVAV VGLGSSGRIF LGVNVEFPNL PLHHSIHAEQ FLVTNLTLNG ERHLNFFAVS
101: AAPCGHCRQF LQEIRDAPEI KILITDPNNS ADSDSAADSD GFLRLGSFLP HRFGPDDLLG KDHPLLLESH DNHLKISDLD SICNGNTDSS ADLKQTALAA
201: ANRSYAPYSL CPSGVSLVDC DGKVYRGWYM ESAAYNPSMG PVQAALVDYV ANGGGGGYER IVGAVLVEKE DAVVRQEHTA RLLLETISPK CEFKVFHCYE
301: A
101: AAPCGHCRQF LQEIRDAPEI KILITDPNNS ADSDSAADSD GFLRLGSFLP HRFGPDDLLG KDHPLLLESH DNHLKISDLD SICNGNTDSS ADLKQTALAA
201: ANRSYAPYSL CPSGVSLVDC DGKVYRGWYM ESAAYNPSMG PVQAALVDYV ANGGGGGYER IVGAVLVEKE DAVVRQEHTA RLLLETISPK CEFKVFHCYE
301: A
Arabidopsis Description
CDA1Cytidine deaminase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65896]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.