Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G29600.1 | Thale cress | cytosol | 71.81 | 78.83 |
| AT4G29630.1 | Thale cress | cytosol | 48.37 | 73.09 |
| HORVU5Hr1G034090.1 | Barley | mitochondrion | 7.72 | 59.09 |
| HORVU5Hr1G075600.1 | Barley | mitochondrion | 7.72 | 59.09 |
| AT4G29610.1 | Thale cress | cytosol | 48.96 | 56.31 |
| HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 11.57 | 54.93 |
| Bra024141.1-P | Field mustard | cytosol | 45.1 | 54.48 |
| CDY30210 | Canola | cytosol | 45.1 | 54.48 |
| CDY54269 | Canola | cytosol | 44.81 | 54.12 |
| HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 10.98 | 52.11 |
| AT4G29650.1 | Thale cress | cytosol | 37.98 | 51.0 |
| AT2G19570.1 | Thale cress | cytosol | 43.32 | 48.51 |
| KRH60135 | Soybean | cytosol | 41.54 | 47.78 |
| KRH41424 | Soybean | plasma membrane | 39.17 | 47.65 |
| KRH49056 | Soybean | plastid | 39.17 | 47.48 |
| AT4G29640.1 | Thale cress | cytosol | 47.77 | 46.53 |
| VIT_11s0016g02340.t01 | Wine grape | cytosol | 42.14 | 46.25 |
| AT4G29570.1 | Thale cress | cytosol | 38.87 | 44.71 |
| GSMUA_Achr7P24040_001 | Banana | cytosol | 35.61 | 42.25 |
| PGSC0003DMT400020044 | Potato | cytosol | 40.36 | 41.98 |
| Solyc07g021750.1.1 | Tomato | cytosol | 40.36 | 41.72 |
| HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 16.91 | 41.01 |
| Zm00001d011710_P001 | Maize | cytosol, extracellular | 37.09 | 40.06 |
| Os01t0712700-01 | Rice | cytosol | 36.8 | 39.74 |
| HORVU3Hr1G067290.1 | Barley | cytosol | 35.91 | 39.03 |
| GSMUA_Achr3P32380_001 | Banana | cytosol | 23.74 | 38.84 |
| TraesCS3A01G249300.1 | Wheat | cytosol | 35.31 | 38.39 |
| TraesCS3D01G249300.1 | Wheat | cytosol | 35.31 | 38.39 |
| EES03512 | Sorghum | cytosol | 35.91 | 38.29 |
| TraesCS3B01G278200.1 | Wheat | cytosol | 35.01 | 38.06 |
| Zm00001d043674_P001 | Maize | cytosol | 35.61 | 37.97 |
| HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 16.02 | 36.24 |
| Os06t0611600-00 | Rice | mitochondrion | 22.55 | 36.19 |
| KRH63089 | Soybean | cytosol | 19.88 | 36.02 |
| AT4G29580.2 | Thale cress | nucleus | 37.69 | 28.54 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 31.45 | 26.77 |
| OQU91901 | Sorghum | cytosol, plastid | 16.91 | 19.13 |
Protein Annotations
| KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | MapMan:6.2.4.2 | EntrezGene:829083 | ProteinID:AAC69567.2 |
| ProteinID:AAD30445.1 | ProteinID:AEE85652.1 | EMBL:AJ005811 | InterPro:APOBEC/CMP_deaminase_Zn-bd | ArrayExpress:AT4G29620 | EnsemblPlantsGene:AT4G29620 |
| RefSeq:AT4G29620 | TAIR:AT4G29620 | RefSeq:AT4G29620-TAIR-G | EnsemblPlants:AT4G29620.1 | TAIR:AT4G29620.1 | Unigene:At.79 |
| ProteinID:CAB45322.1 | ProteinID:CAB79720.1 | InterPro:CMP_dCMP_dom | InterPro:Cyd/dCyd_deaminase_Zn-bd | InterPro:Cyt_deam_dimer | InterPro:Cytidine_deaminase-like |
| EMBL:DQ446882 | EMBL:DQ653234 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004126 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009972 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0046872 | InterPro:IPR002125 | RefSeq:NP_194691.1 | UniProt:O65571 | PFAM:PF00383 |
| PFAM:PF08211 | PIRSF:PIRSF006334 | PO:PO:0007616 | PO:PO:0009030 | ScanProsite:PS00903 | PFscan:PS51747 |
| PANTHER:PTHR11644 | PANTHER:PTHR11644:SF15 | SUPFAM:SSF53927 | TIGRFAMs:TIGR01355 | UniParc:UPI0000048A1B | : |
Description
CDA2Cytidine deaminase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65571]
Coordinates
chr4:+:14519863..14521087
Molecular Weight (calculated)
37108.0 Da
IEP (calculated)
8.811
GRAVY (calculated)
-0.019
Length
337 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQRPNLLSH LQDLVTKFKN MTMAQDRFKF VFTANEAALE GVTDPIRLPN LIRKAMCLAR APISKYKVGA VGRASSGRVY LGVNVDFPGL PLHHSIHAEQ
101: FLVTNLALNY EKDLCKLAVA ISTDGLEFGT PCGNCLQFLM EMSNALDMKI LSKPKHEAGS FSSLRLLLPN VLPKGSPFLL EKRYNCLTLS GSAGEICSLD
201: CSHLKRRALA AANNSFSPYT ESPSGVALLD NDGNWYRGWY IESVASNPSL GPVQAALVDF VARSRGKMFN KIVQAVLVEK NNASVSQERT AKIILDTIAP
301: NCDFKVFHCS VDCAKRLKYL RETLVIDTLG DYTGLHY
101: FLVTNLALNY EKDLCKLAVA ISTDGLEFGT PCGNCLQFLM EMSNALDMKI LSKPKHEAGS FSSLRLLLPN VLPKGSPFLL EKRYNCLTLS GSAGEICSLD
201: CSHLKRRALA AANNSFSPYT ESPSGVALLD NDGNWYRGWY IESVASNPSL GPVQAALVDF VARSRGKMFN KIVQAVLVEK NNASVSQERT AKIILDTIAP
301: NCDFKVFHCS VDCAKRLKYL RETLVIDTLG DYTGLHY
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.