Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G29650.1 | Thale cress | cytosol | 53.24 | 62.15 |
| CDY30210 | Canola | cytosol | 54.95 | 57.71 |
| Bra024141.1-P | Field mustard | cytosol | 54.95 | 57.71 |
| CDY54269 | Canola | cytosol | 54.61 | 57.35 |
| AT4G29600.1 | Thale cress | cytosol | 59.73 | 57.0 |
| HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 13.31 | 54.93 |
| AT2G19570.1 | Thale cress | cytosol | 55.97 | 54.49 |
| AT4G29630.1 | Thale cress | cytosol | 41.3 | 54.26 |
| HORVU5Hr1G075600.1 | Barley | mitochondrion | 7.85 | 52.27 |
| HORVU5Hr1G034090.1 | Barley | mitochondrion | 7.85 | 52.27 |
| HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 12.29 | 50.7 |
| KRH49056 | Soybean | plastid | 46.76 | 49.28 |
| AT4G29620.1 | Thale cress | cytosol | 56.31 | 48.96 |
| VIT_11s0016g02340.t01 | Wine grape | cytosol | 51.19 | 48.86 |
| KRH60135 | Soybean | cytosol | 48.81 | 48.81 |
| AT4G29640.1 | Thale cress | cytosol | 57.0 | 48.27 |
| KRH41424 | Soybean | plasma membrane | 44.71 | 47.29 |
| AT4G29570.1 | Thale cress | cytosol | 46.42 | 46.42 |
| HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 21.84 | 46.04 |
| GSMUA_Achr7P24040_001 | Banana | cytosol | 43.69 | 45.07 |
| PGSC0003DMT400020044 | Potato | cytosol | 48.46 | 43.83 |
| Solyc07g021750.1.1 | Tomato | cytosol | 48.46 | 43.56 |
| KRH63089 | Soybean | cytosol | 26.28 | 41.4 |
| Zm00001d011710_P001 | Maize | cytosol, extracellular | 44.03 | 41.35 |
| HORVU3Hr1G067290.1 | Barley | cytosol | 43.69 | 41.29 |
| GSMUA_Achr3P32380_001 | Banana | cytosol | 29.01 | 41.26 |
| TraesCS3B01G278200.1 | Wheat | cytosol | 43.34 | 40.97 |
| Os01t0712700-01 | Rice | cytosol | 43.34 | 40.71 |
| TraesCS3A01G249300.1 | Wheat | cytosol | 43.0 | 40.65 |
| TraesCS3D01G249300.1 | Wheat | cytosol | 43.0 | 40.65 |
| HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 20.48 | 40.27 |
| Zm00001d043674_P001 | Maize | cytosol | 42.32 | 39.24 |
| EES03512 | Sorghum | cytosol | 41.64 | 38.61 |
| Os06t0611600-00 | Rice | mitochondrion | 27.3 | 38.1 |
| AT4G29580.2 | Thale cress | nucleus | 44.37 | 29.21 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 37.2 | 27.53 |
| OQU91901 | Sorghum | cytosol, plastid | 20.82 | 20.47 |
Protein Annotations
| KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | MapMan:6.2.4.2 | EntrezGene:829082 | ProteinID:AAC69566.1 |
| ProteinID:AAD30444.1 | ProteinID:AEE85651.1 | ArrayExpress:AT4G29610 | EnsemblPlantsGene:AT4G29610 | RefSeq:AT4G29610 | TAIR:AT4G29610 |
| RefSeq:AT4G29610-TAIR-G | EnsemblPlants:AT4G29610.1 | TAIR:AT4G29610.1 | ProteinID:CAB45321.1 | ProteinID:CAB79719.1 | InterPro:CMP_dCMP_dom |
| InterPro:Cyd/dCyd_deaminase_Zn-bd | InterPro:Cyt_deam_dimer | InterPro:Cytidine_deaminase-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004126 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009972 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046872 | InterPro:IPR002125 | RefSeq:NP_194690.1 | PFAM:PF00383 |
| PFAM:PF08211 | PIRSF:PIRSF006334 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001185 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 |
| PFscan:PS51747 | PANTHER:PTHR11644 | PANTHER:PTHR11644:SF2 | UniProt:Q9SU86 | SUPFAM:SSF53927 | TIGRFAMs:TIGR01355 |
| UniParc:UPI0000048A1A | : | : | : | : | : |
Description
CDA6Cytidine deaminase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU86]
Coordinates
chr4:+:14517393..14518519
Molecular Weight (calculated)
32045.6 Da
IEP (calculated)
5.658
GRAVY (calculated)
-0.105
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFVYTPSEA AEEGVRGPSD LPKLIDKAMS LARAPVSTFK VGAVGLTSSG EVFLGVNVEF PNLPLHHTIH AEQFLVTNLA LNSMKKLTHI AVSVTGTIFG
101: APCGHCRQFY QEMRNAPEIE ILIKRPKDGI DEFMSLKSLM PERFGPDSIL PEDASLLLEQ RDNSLVLSDP EEICSDPEDC SHTKCRALAA ANKSYAPYSK
201: CPSGVALICG GEVYKGWYIE SVAYNPSLGP VEAALVDFVA RGGGKEFNEI TEVVLVEMKD VKVSQEATAR TFLDKIAPKC DFKVLHCYKT NKN
101: APCGHCRQFY QEMRNAPEIE ILIKRPKDGI DEFMSLKSLM PERFGPDSIL PEDASLLLEQ RDNSLVLSDP EEICSDPEDC SHTKCRALAA ANKSYAPYSK
201: CPSGVALICG GEVYKGWYIE SVAYNPSLGP VEAALVDFVA RGGGKEFNEI TEVVLVEMKD VKVSQEATAR TFLDKIAPKC DFKVLHCYKT NKN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.