Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
Zm00001d011710_P001 | Maize | cytosol, extracellular | 81.41 | 81.41 |
TraesCS3A01G249300.1 | Wheat | cytosol | 79.81 | 80.32 |
TraesCS3B01G278200.1 | Wheat | cytosol | 79.49 | 80.0 |
HORVU5Hr1G075600.1 | Barley | mitochondrion | 11.22 | 79.55 |
HORVU5Hr1G034090.1 | Barley | mitochondrion | 11.22 | 79.55 |
Zm00001d043674_P001 | Maize | cytosol | 80.45 | 79.43 |
TraesCS3D01G249300.1 | Wheat | cytosol | 78.85 | 79.35 |
HORVU3Hr1G067290.1 | Barley | cytosol | 78.85 | 79.35 |
EES03512 | Sorghum | cytosol | 79.49 | 78.48 |
HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 17.31 | 76.06 |
Os06t0611600-00 | Rice | mitochondrion | 50.32 | 74.76 |
HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 16.99 | 74.65 |
HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 33.01 | 74.1 |
HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 32.05 | 67.11 |
GSMUA_Achr7P24040_001 | Banana | cytosol | 57.69 | 63.38 |
GSMUA_Achr3P32380_001 | Banana | cytosol | 37.18 | 56.31 |
Bra039004.1-P | Field mustard | cytosol | 48.4 | 51.54 |
CDY30209 | Canola | cytosol | 47.76 | 51.38 |
CDY58323 | Canola | cytosol | 48.4 | 51.36 |
CDY65102 | Canola | cytosol | 47.44 | 50.34 |
KRH49056 | Soybean | plastid | 44.55 | 50.0 |
Bra024140.1-P | Field mustard | cytosol | 48.08 | 48.86 |
VIT_11s0016g02340.t01 | Wine grape | cytosol | 47.76 | 48.53 |
KRH41424 | Soybean | plasma membrane | 42.95 | 48.38 |
CDY54276 | Canola | cytosol | 48.08 | 47.92 |
AT2G19570.1 | Thale cress | cytosol | 46.15 | 47.84 |
KRH60135 | Soybean | cytosol | 44.87 | 47.78 |
PGSC0003DMT400020044 | Potato | cytosol | 48.08 | 46.3 |
Solyc07g021750.1.1 | Tomato | cytosol | 47.76 | 45.71 |
Bra024141.1-P | Field mustard | cytosol | 39.74 | 44.44 |
CDY30210 | Canola | cytosol | 39.74 | 44.44 |
CDY54269 | Canola | cytosol | 39.74 | 44.44 |
AT4G29610.1 | Thale cress | cytosol | 40.71 | 43.34 |
KRH63089 | Soybean | cytosol | 25.64 | 43.01 |
AT4G29600.1 | Thale cress | cytosol | 41.99 | 42.67 |
AT4G29630.1 | Thale cress | cytosol | 30.45 | 42.6 |
AT4G29650.1 | Thale cress | cytosol | 33.97 | 42.23 |
GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 51.92 | 40.91 |
AT4G29620.1 | Thale cress | cytosol | 39.74 | 36.8 |
AT4G29570.1 | Thale cress | cytosol | 34.29 | 36.52 |
CDY54272 | Canola | cytosol | 31.41 | 35.13 |
AT4G29640.1 | Thale cress | cytosol | 35.58 | 32.08 |
CDY54275 | Canola | mitochondrion | 28.53 | 31.12 |
OQU91901 | Sorghum | cytosol, plastid | 25.96 | 27.18 |
AT4G29580.2 | Thale cress | nucleus | 31.09 | 21.8 |
Protein Annotations
KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | EntrezGene:4325937 | MapMan:6.2.4.2 | EMBL:AK243606 |
InterPro:APOBEC/CMP_deaminase_Zn-bd | ProteinID:BAB89118.1 | ProteinID:BAF05965.1 | ProteinID:BAS73996.1 | InterPro:CMP_dCMP_dom | InterPro:Cyd/dCyd_deaminase_Zn-bd |
InterPro:Cyt_deam_dimer | InterPro:Cytidine_deaminase-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004126 | GO:GO:0005488 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009972 | GO:GO:0009987 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | InterPro:IPR002125 | EnsemblPlantsGene:Os01g0712700 | EnsemblPlants:Os01t0712700-01 |
PFAM:PF00383 | PFAM:PF08211 | PIRSF:PIRSF006334 | ScanProsite:PS00903 | PFscan:PS51747 | PANTHER:PTHR11644 |
PANTHER:PTHR11644:SF2 | UniProt:Q8S0I1 | SUPFAM:SSF53927 | TIGRFAMs:TIGR01355 | UniParc:UPI00000A7297 | RefSeq:XP_015621794.1 |
SEG:seg | : | : | : | : | : |
Description
CMP/dCMP deaminase, zinc-binding domain containing protein. (Os01t0712700-01)
Coordinates
chr1:-:29605141..29606513
Molecular Weight (calculated)
31973.0 Da
IEP (calculated)
4.928
GRAVY (calculated)
0.181
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEKVAPKS DAAPAVELLG FVMSAEEAER AAAAAGVETV EDLLPLLVPS AMRRARAPIS RFPVGAVGLG ASGRVYAGVN LEFRGLPLSH SVHAEQFLVV
101: NAAAAGESEL RAVAVSHMPC GHCRQFLQEI RGAGGIRIIV TSDAEDGCAP EWRTVASLLP RPFGPHDLLP KHVPLVLEPH DNPLGEPAAV ANGFAHGDLE
201: ARLREAAEAA ARAAHAPYSE CPSGFAVADG EGKVYAGGCL ESAAYNPTLG PVQAAIIGMV AAGGGAAGDV VAAALVEKEA GLVSQEATAR IFLAAVAPQA
301: TFHVYNYTPS DA
101: NAAAAGESEL RAVAVSHMPC GHCRQFLQEI RGAGGIRIIV TSDAEDGCAP EWRTVASLLP RPFGPHDLLP KHVPLVLEPH DNPLGEPAAV ANGFAHGDLE
201: ARLREAAEAA ARAAHAPYSE CPSGFAVADG EGKVYAGGCL ESAAYNPTLG PVQAAIIGMV AAGGGAAGDV VAAALVEKEA GLVSQEATAR IFLAAVAPQA
301: TFHVYNYTPS DA
001: MDKPSFVIQS KEAESAAKQL GVSVIQLLPS LVKPAQSYAR TPISKFNVAV VGLGSSGRIF LGVNVEFPNL PLHHSIHAEQ FLVTNLTLNG ERHLNFFAVS
101: AAPCGHCRQF LQEIRDAPEI KILITDPNNS ADSDSAADSD GFLRLGSFLP HRFGPDDLLG KDHPLLLESH DNHLKISDLD SICNGNTDSS ADLKQTALAA
201: ANRSYAPYSL CPSGVSLVDC DGKVYRGWYM ESAAYNPSMG PVQAALVDYV ANGGGGGYER IVGAVLVEKE DAVVRQEHTA RLLLETISPK CEFKVFHCYE
301: A
101: AAPCGHCRQF LQEIRDAPEI KILITDPNNS ADSDSAADSD GFLRLGSFLP HRFGPDDLLG KDHPLLLESH DNHLKISDLD SICNGNTDSS ADLKQTALAA
201: ANRSYAPYSL CPSGVSLVDC DGKVYRGWYM ESAAYNPSMG PVQAALVDYV ANGGGGGYER IVGAVLVEKE DAVVRQEHTA RLLLETISPK CEFKVFHCYE
301: A
Arabidopsis Description
CDA1Cytidine deaminase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65896]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.