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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d011710_P001 Maize cytosol, extracellular 81.41 81.41
TraesCS3A01G249300.1 Wheat cytosol 79.81 80.32
TraesCS3B01G278200.1 Wheat cytosol 79.49 80.0
HORVU5Hr1G075600.1 Barley mitochondrion 11.22 79.55
HORVU5Hr1G034090.1 Barley mitochondrion 11.22 79.55
Zm00001d043674_P001 Maize cytosol 80.45 79.43
TraesCS3D01G249300.1 Wheat cytosol 78.85 79.35
HORVU3Hr1G067290.1 Barley cytosol 78.85 79.35
EES03512 Sorghum cytosol 79.49 78.48
HORVU3Hr1G020270.1 Barley extracellular, peroxisome 17.31 76.06
Os06t0611600-00 Rice mitochondrion 50.32 74.76
HORVU4Hr1G074340.1 Barley extracellular, peroxisome 16.99 74.65
HORVU4Hr1G083900.1 Barley cytosol, mitochondrion, plastid 33.01 74.1
HORVU4Hr1G036900.1 Barley cytosol, extracellular, mitochondrion 32.05 67.11
GSMUA_Achr7P24040_001 Banana cytosol 57.69 63.38
GSMUA_Achr3P32380_001 Banana cytosol 37.18 56.31
Bra039004.1-P Field mustard cytosol 48.4 51.54
CDY30209 Canola cytosol 47.76 51.38
CDY58323 Canola cytosol 48.4 51.36
CDY65102 Canola cytosol 47.44 50.34
KRH49056 Soybean plastid 44.55 50.0
Bra024140.1-P Field mustard cytosol 48.08 48.86
VIT_11s0016g02340.t01 Wine grape cytosol 47.76 48.53
KRH41424 Soybean plasma membrane 42.95 48.38
CDY54276 Canola cytosol 48.08 47.92
AT2G19570.1 Thale cress cytosol 46.15 47.84
KRH60135 Soybean cytosol 44.87 47.78
PGSC0003DMT400020044 Potato cytosol 48.08 46.3
Solyc07g021750.1.1 Tomato cytosol 47.76 45.71
Bra024141.1-P Field mustard cytosol 39.74 44.44
CDY30210 Canola cytosol 39.74 44.44
CDY54269 Canola cytosol 39.74 44.44
AT4G29610.1 Thale cress cytosol 40.71 43.34
KRH63089 Soybean cytosol 25.64 43.01
AT4G29600.1 Thale cress cytosol 41.99 42.67
AT4G29630.1 Thale cress cytosol 30.45 42.6
AT4G29650.1 Thale cress cytosol 33.97 42.23
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum, golgi 51.92 40.91
AT4G29620.1 Thale cress cytosol 39.74 36.8
AT4G29570.1 Thale cress cytosol 34.29 36.52
CDY54272 Canola cytosol 31.41 35.13
AT4G29640.1 Thale cress cytosol 35.58 32.08
CDY54275 Canola mitochondrion 28.53 31.12
OQU91901 Sorghum cytosol, plastid 25.96 27.18
AT4G29580.2 Thale cress nucleus 31.09 21.8
Protein Annotations
KEGG:00240+3.5.4.5KEGG:00983+3.5.4.5Gene3D:3.40.140.10EntrezGene:4325937MapMan:6.2.4.2EMBL:AK243606
InterPro:APOBEC/CMP_deaminase_Zn-bdProteinID:BAB89118.1ProteinID:BAF05965.1ProteinID:BAS73996.1InterPro:CMP_dCMP_domInterPro:Cyd/dCyd_deaminase_Zn-bd
InterPro:Cyt_deam_dimerInterPro:Cytidine_deaminase-likeGO:GO:0003674GO:GO:0003824GO:GO:0004126GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829GO:GO:0006139
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009056GO:GO:0009972GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016787InterPro:IPR002125EnsemblPlantsGene:Os01g0712700EnsemblPlants:Os01t0712700-01
PFAM:PF00383PFAM:PF08211PIRSF:PIRSF006334ScanProsite:PS00903PFscan:PS51747PANTHER:PTHR11644
PANTHER:PTHR11644:SF2UniProt:Q8S0I1SUPFAM:SSF53927TIGRFAMs:TIGR01355UniParc:UPI00000A7297RefSeq:XP_015621794.1
SEG:seg:::::
Description
CMP/dCMP deaminase, zinc-binding domain containing protein. (Os01t0712700-01)
Coordinates
chr1:-:29605141..29606513
Molecular Weight (calculated)
31973.0 Da
IEP (calculated)
4.928
GRAVY (calculated)
0.181
Length
312 amino acids
Sequence
(BLAST)
001: MGEEKVAPKS DAAPAVELLG FVMSAEEAER AAAAAGVETV EDLLPLLVPS AMRRARAPIS RFPVGAVGLG ASGRVYAGVN LEFRGLPLSH SVHAEQFLVV
101: NAAAAGESEL RAVAVSHMPC GHCRQFLQEI RGAGGIRIIV TSDAEDGCAP EWRTVASLLP RPFGPHDLLP KHVPLVLEPH DNPLGEPAAV ANGFAHGDLE
201: ARLREAAEAA ARAAHAPYSE CPSGFAVADG EGKVYAGGCL ESAAYNPTLG PVQAAIIGMV AAGGGAAGDV VAAALVEKEA GLVSQEATAR IFLAAVAPQA
301: TFHVYNYTPS DA
Best Arabidopsis Sequence Match ( AT2G19570.1 )
(BLAST)
001: MDKPSFVIQS KEAESAAKQL GVSVIQLLPS LVKPAQSYAR TPISKFNVAV VGLGSSGRIF LGVNVEFPNL PLHHSIHAEQ FLVTNLTLNG ERHLNFFAVS
101: AAPCGHCRQF LQEIRDAPEI KILITDPNNS ADSDSAADSD GFLRLGSFLP HRFGPDDLLG KDHPLLLESH DNHLKISDLD SICNGNTDSS ADLKQTALAA
201: ANRSYAPYSL CPSGVSLVDC DGKVYRGWYM ESAAYNPSMG PVQAALVDYV ANGGGGGYER IVGAVLVEKE DAVVRQEHTA RLLLETISPK CEFKVFHCYE
301: A
Arabidopsis Description
CDA1Cytidine deaminase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65896]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.