Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G29630.1 | Thale cress | cytosol | 58.31 | 80.27 |
| AT4G29620.1 | Thale cress | cytosol | 78.83 | 71.81 |
| AT4G29610.1 | Thale cress | cytosol | 57.0 | 59.73 |
| CDY30210 | Canola | cytosol | 51.79 | 56.99 |
| Bra024141.1-P | Field mustard | cytosol | 51.79 | 56.99 |
| CDY54269 | Canola | cytosol | 51.47 | 56.63 |
| HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 12.7 | 54.93 |
| HORVU5Hr1G034090.1 | Barley | mitochondrion | 7.82 | 54.55 |
| HORVU5Hr1G075600.1 | Barley | mitochondrion | 7.82 | 54.55 |
| AT4G29650.1 | Thale cress | cytosol | 43.32 | 52.99 |
| AT2G19570.1 | Thale cress | cytosol | 51.47 | 52.49 |
| HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 12.05 | 52.11 |
| VIT_11s0016g02340.t01 | Wine grape | cytosol | 49.84 | 49.84 |
| KRH60135 | Soybean | cytosol | 47.56 | 49.83 |
| KRH41424 | Soybean | plasma membrane | 44.63 | 49.46 |
| KRH49056 | Soybean | plastid | 44.63 | 49.28 |
| AT4G29640.1 | Thale cress | cytosol | 54.4 | 48.27 |
| GSMUA_Achr7P24040_001 | Banana | cytosol | 43.32 | 46.83 |
| PGSC0003DMT400020044 | Potato | cytosol | 47.56 | 45.06 |
| AT4G29570.1 | Thale cress | cytosol | 42.67 | 44.71 |
| GSMUA_Achr3P32380_001 | Banana | cytosol | 29.64 | 44.17 |
| Solyc07g021750.1.1 | Tomato | cytosol | 46.58 | 43.87 |
| HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 19.54 | 43.17 |
| Os01t0712700-01 | Rice | cytosol | 42.67 | 41.99 |
| TraesCS3D01G249300.1 | Wheat | cytosol | 41.69 | 41.29 |
| TraesCS3A01G249300.1 | Wheat | cytosol | 41.69 | 41.29 |
| HORVU3Hr1G067290.1 | Barley | cytosol | 41.37 | 40.97 |
| TraesCS3B01G278200.1 | Wheat | cytosol | 41.37 | 40.97 |
| Zm00001d011710_P001 | Maize | cytosol, extracellular | 41.37 | 40.71 |
| Zm00001d043674_P001 | Maize | cytosol | 41.04 | 39.87 |
| EES03512 | Sorghum | cytosol | 41.04 | 39.87 |
| KRH63089 | Soybean | cytosol | 24.1 | 39.78 |
| Os06t0611600-00 | Rice | mitochondrion | 26.71 | 39.05 |
| HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 18.89 | 38.93 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 35.83 | 27.78 |
| AT4G29580.2 | Thale cress | nucleus | 39.74 | 27.42 |
| OQU91901 | Sorghum | cytosol, plastid | 18.89 | 19.46 |
Protein Annotations
| KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | MapMan:6.2.4.2 | EntrezGene:829081 | ProteinID:AAC69565.1 |
| ProteinID:AAD30443.1 | ProteinID:AEE85650.1 | ArrayExpress:AT4G29600 | EnsemblPlantsGene:AT4G29600 | RefSeq:AT4G29600 | TAIR:AT4G29600 |
| RefSeq:AT4G29600-TAIR-G | EnsemblPlants:AT4G29600.1 | TAIR:AT4G29600.1 | Unigene:At.54546 | ProteinID:CAB45320.1 | ProteinID:CAB79718.1 |
| InterPro:CMP_dCMP_dom | InterPro:Cyd/dCyd_deaminase_Zn-bd | InterPro:Cyt_deam_dimer | InterPro:Cytidine_deaminase-like | EMBL:DQ056661 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004126 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009056 | GO:GO:0009972 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046872 | InterPro:IPR002125 |
| RefSeq:NP_194689.1 | PFAM:PF00383 | PFAM:PF08211 | PIRSF:PIRSF006334 | PFscan:PS51747 | PANTHER:PTHR11644 |
| PANTHER:PTHR11644:SF2 | UniProt:Q9SU87 | SUPFAM:SSF53927 | TIGRFAMs:TIGR01355 | UniParc:UPI0000048A19 | : |
Description
CDA7Cytidine deaminase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU87]
Coordinates
chr4:+:14515487..14516501
Molecular Weight (calculated)
33727.6 Da
IEP (calculated)
8.310
GRAVY (calculated)
-0.150
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQDKYKFV FTAKEAASEG VTEPIRLPKL IRKAMSLARG PISKYKVGAV GRASSGRVYL GVNVEFPGLP LHHSIHPEQF LVTNLALNSE KGLRQLAVAI
101: SSDCIEFGAP CGNCRQFLME TSNELDIKIL LKSKHEAEGS FSSLKLLLPY RFTPDDVLPK GSPLLLEKRD NCLTLSGSTE EICSSDCSHL KCKALAAANN
201: SFSPYTESPS GVALQDDEGK WYRGWYIESV AYSPSLGPVQ AALVDFVARS RGKGFNKIVE AVLVEKNNAR VSQERTAKMI LDTIAAPNCD FKVFHCYVDL
301: QKKFITE
101: SSDCIEFGAP CGNCRQFLME TSNELDIKIL LKSKHEAEGS FSSLKLLLPY RFTPDDVLPK GSPLLLEKRD NCLTLSGSTE EICSSDCSHL KCKALAAANN
201: SFSPYTESPS GVALQDDEGK WYRGWYIESV AYSPSLGPVQ AALVDFVARS RGKGFNKIVE AVLVEKNNAR VSQERTAKMI LDTIAAPNCD FKVFHCYVDL
301: QKKFITE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.