Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G29610.1 | Thale cress | cytosol | 48.27 | 57.0 |
| AT4G29600.1 | Thale cress | cytosol | 48.27 | 54.4 |
| AT4G29650.1 | Thale cress | cytosol | 38.44 | 52.99 |
| AT4G29630.1 | Thale cress | cytosol | 32.66 | 50.67 |
| Bra024141.1-P | Field mustard | cytosol | 40.46 | 50.18 |
| CDY30210 | Canola | cytosol | 40.46 | 50.18 |
| CDY54269 | Canola | cytosol | 39.88 | 49.46 |
| HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 9.83 | 47.89 |
| HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 9.83 | 47.89 |
| AT4G29620.1 | Thale cress | cytosol | 46.53 | 47.77 |
| AT2G19570.1 | Thale cress | cytosol | 39.6 | 45.51 |
| KRH41424 | Soybean | plasma membrane | 34.97 | 43.68 |
| VIT_11s0016g02340.t01 | Wine grape | cytosol | 38.44 | 43.32 |
| AT4G29570.1 | Thale cress | cytosol | 36.42 | 43.0 |
| KRH60135 | Soybean | cytosol | 36.42 | 43.0 |
| KRH49056 | Soybean | plastid | 33.81 | 42.09 |
| GSMUA_Achr7P24040_001 | Banana | cytosol | 32.66 | 39.79 |
| PGSC0003DMT400020044 | Potato | cytosol | 36.42 | 38.89 |
| HORVU5Hr1G034090.1 | Barley | mitochondrion | 4.91 | 38.64 |
| HORVU5Hr1G075600.1 | Barley | mitochondrion | 4.91 | 38.64 |
| Solyc07g021750.1.1 | Tomato | cytosol | 36.13 | 38.34 |
| TraesCS3A01G249300.1 | Wheat | cytosol | 34.1 | 38.06 |
| TraesCS3D01G249300.1 | Wheat | cytosol | 33.81 | 37.74 |
| TraesCS3B01G278200.1 | Wheat | cytosol | 33.53 | 37.42 |
| HORVU3Hr1G067290.1 | Barley | cytosol | 32.95 | 36.77 |
| HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 14.74 | 36.69 |
| Zm00001d011710_P001 | Maize | cytosol, extracellular | 32.95 | 36.54 |
| EES03512 | Sorghum | cytosol | 32.95 | 36.08 |
| Zm00001d043674_P001 | Maize | cytosol | 32.66 | 35.76 |
| Os01t0712700-01 | Rice | cytosol | 32.08 | 35.58 |
| HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 15.03 | 34.9 |
| Os06t0611600-00 | Rice | mitochondrion | 20.23 | 33.33 |
| GSMUA_Achr3P32380_001 | Banana | cytosol | 19.65 | 33.01 |
| KRH63089 | Soybean | cytosol | 17.05 | 31.72 |
| AT4G29580.2 | Thale cress | nucleus | 35.26 | 27.42 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 29.48 | 25.76 |
| OQU91901 | Sorghum | cytosol, plastid | 15.61 | 18.12 |
Protein Annotations
| KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | MapMan:6.2.4.2 | EntrezGene:829085 | ProteinID:AAC69569.1 |
| ProteinID:AAD30447.1 | ProteinID:AEE85654.1 | InterPro:APOBEC/CMP_deaminase_Zn-bd | ArrayExpress:AT4G29640 | EnsemblPlantsGene:AT4G29640 | RefSeq:AT4G29640 |
| TAIR:AT4G29640 | RefSeq:AT4G29640-TAIR-G | EnsemblPlants:AT4G29640.1 | TAIR:AT4G29640.1 | Unigene:At.54549 | ProteinID:CAB45324.1 |
| ProteinID:CAB79722.1 | InterPro:CMP_dCMP_dom | InterPro:Cyd/dCyd_deaminase_Zn-bd | InterPro:Cyt_deam_dimer | InterPro:Cytidine_deaminase-like | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004126 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009056 | GO:GO:0009972 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046872 | InterPro:IPR002125 |
| RefSeq:NP_194693.1 | PFAM:PF08211 | PIRSF:PIRSF006334 | PO:PO:0000037 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | ScanProsite:PS00903 |
| PFscan:PS51747 | PANTHER:PTHR11644 | PANTHER:PTHR11644:SF2 | UniProt:Q9S7L8 | SUPFAM:SSF53927 | TIGRFAMs:TIGR01355 |
| UniParc:UPI0000048A1D | : | : | : | : | : |
Description
CDA5Cytidine deaminase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7L8]
Coordinates
chr4:+:14525830..14526881
Molecular Weight (calculated)
38082.5 Da
IEP (calculated)
6.424
GRAVY (calculated)
-0.246
Length
346 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQQYKFVFT AEQAASEGVT DHKKLPKLIR KARNLVKAPS KVGAVGRASS GRFYLGVNVE FKGLLPHFSI HAEQFLIANL ALNSEPKLTH LAVSDNGTVF
101: QDPCYDCTRF LKEINNAHQI EILIKNAHGR DGSFKSLESH MPDEFGSESI LSAEPSLLLM ERDNCLALID EDSAAGGISS NADLCSFLKL EALKAANKSY
201: APYRKCPSGV ALFCEGEVYA GWYIETVDRT ISLGPVQAAL VDFIARGEGK GFDKITGAVL VEKKDAKVGQ EDTARKLLEK IAAPNCDFKV FHCQEERKDW
301: ITGAVLVEKK DAKEGQEGKL LEKIAAPNCD FKVSHCDEEL KDWIKL
101: QDPCYDCTRF LKEINNAHQI EILIKNAHGR DGSFKSLESH MPDEFGSESI LSAEPSLLLM ERDNCLALID EDSAAGGISS NADLCSFLKL EALKAANKSY
201: APYRKCPSGV ALFCEGEVYA GWYIETVDRT ISLGPVQAAL VDFIARGEGK GFDKITGAVL VEKKDAKVGQ EDTARKLLEK IAAPNCDFKV FHCQEERKDW
301: ITGAVLVEKK DAKEGQEGKL LEKIAAPNCD FKVSHCDEEL KDWIKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.