Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G29610.1 | Thale cress | cytosol | 62.15 | 53.24 |
| Bra024141.1-P | Field mustard | cytosol | 49.4 | 44.44 |
| CDY30210 | Canola | cytosol | 49.4 | 44.44 |
| AT2G19570.1 | Thale cress | cytosol | 52.59 | 43.85 |
| CDY54269 | Canola | cytosol | 48.61 | 43.73 |
| AT4G29600.1 | Thale cress | cytosol | 52.99 | 43.32 |
| VIT_11s0016g02340.t01 | Wine grape | cytosol | 51.0 | 41.69 |
| HORVU5Hr1G075600.1 | Barley | mitochondrion | 7.17 | 40.91 |
| HORVU5Hr1G034090.1 | Barley | mitochondrion | 7.17 | 40.91 |
| KRH60135 | Soybean | cytosol | 47.41 | 40.61 |
| KRH41424 | Soybean | plasma membrane | 44.62 | 40.43 |
| KRH49056 | Soybean | plastid | 44.62 | 40.29 |
| AT4G29630.1 | Thale cress | cytosol | 34.26 | 38.56 |
| AT4G29640.1 | Thale cress | cytosol | 52.99 | 38.44 |
| GSMUA_Achr7P24040_001 | Banana | cytosol | 43.43 | 38.38 |
| AT4G29620.1 | Thale cress | cytosol | 51.0 | 37.98 |
| AT4G29570.1 | Thale cress | cytosol | 44.22 | 37.88 |
| PGSC0003DMT400020044 | Potato | cytosol | 47.81 | 37.04 |
| Solyc07g021750.1.1 | Tomato | cytosol | 47.81 | 36.81 |
| Os01t0712700-01 | Rice | cytosol | 42.23 | 33.97 |
| HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 9.56 | 33.8 |
| Zm00001d011710_P001 | Maize | cytosol, extracellular | 41.83 | 33.65 |
| HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 9.16 | 32.39 |
| TraesCS3A01G249300.1 | Wheat | cytosol | 39.84 | 32.26 |
| HORVU3Hr1G067290.1 | Barley | cytosol | 39.44 | 31.94 |
| TraesCS3B01G278200.1 | Wheat | cytosol | 39.44 | 31.94 |
| TraesCS3D01G249300.1 | Wheat | cytosol | 39.44 | 31.94 |
| EES03512 | Sorghum | cytosol | 39.84 | 31.65 |
| Zm00001d043674_P001 | Maize | cytosol | 39.84 | 31.65 |
| GSMUA_Achr3P32380_001 | Banana | cytosol | 25.1 | 30.58 |
| Os06t0611600-00 | Rice | mitochondrion | 23.51 | 28.1 |
| KRH63089 | Soybean | cytosol | 19.92 | 26.88 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 42.23 | 26.77 |
| HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 14.74 | 26.62 |
| AT4G29580.2 | Thale cress | nucleus | 41.83 | 23.6 |
| HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 13.15 | 22.15 |
| OQU91901 | Sorghum | cytosol, plastid | 23.9 | 20.13 |
Protein Annotations
| KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | MapMan:6.2.4.2 | EntrezGene:829086 | ProteinID:AAC69570.1 |
| ProteinID:AAD30448.1 | ProteinID:AEE85655.1 | ArrayExpress:AT4G29650 | EnsemblPlantsGene:AT4G29650 | RefSeq:AT4G29650 | TAIR:AT4G29650 |
| RefSeq:AT4G29650-TAIR-G | EnsemblPlants:AT4G29650.1 | TAIR:AT4G29650.1 | ProteinID:CAB45325.1 | ProteinID:CAB79723.1 | InterPro:CMP_dCMP_dom |
| InterPro:Cyd/dCyd_deaminase_Zn-bd | InterPro:Cytidine_deaminase-like | EMBL:DQ056663 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004126 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009972 |
| GO:GO:0009987 | GO:GO:0016787 | InterPro:IPR002125 | RefSeq:NP_194694.1 | PFAM:PF08211 | PIRSF:PIRSF006334 |
| PO:PO:0000035 | PO:PO:0000036 | PO:PO:0003011 | PO:PO:0008015 | PFscan:PS51747 | PANTHER:PTHR11644 |
| PANTHER:PTHR11644:SF2 | UniProt:Q9S7S2 | SUPFAM:SSF53927 | UniParc:UPI0000048A1E | : | : |
Description
CDA4Probable inactive cytidine deaminase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7S2]
Coordinates
chr4:+:14528510..14529514
Molecular Weight (calculated)
27227.7 Da
IEP (calculated)
4.987
GRAVY (calculated)
0.075
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MTQQLKFILT REEAASKGVS RPSDLVKLEE EAMILARAPI SGVQDAVLGL ASSDRIFLGV NVEFEGLPLH HSISAEQFLV ANLALNFEQE LHACLIPSRF
101: YLESFEEDVP LLLVPQNNRL AHSDPFSAAE ICSNPEHCSH LKCRALTAAN KSNAQYSKCP SGVALICEGE VYGGWCIESA AYNLSLGPVQ AALVDFMARG
201: EGKGFEMITG AVLVEMNDAK VSQEATARIL LKTIAPGCNF SVFRCHKTAE N
101: YLESFEEDVP LLLVPQNNRL AHSDPFSAAE ICSNPEHCSH LKCRALTAAN KSNAQYSKCP SGVALICEGE VYGGWCIESA AYNLSLGPVQ AALVDFMARG
201: EGKGFEMITG AVLVEMNDAK VSQEATARIL LKTIAPGCNF SVFRCHKTAE N
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.