CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G075600.1	Barley	mitochondrion	9.06	61.36
HORVU5Hr1G034090.1	Barley	mitochondrion	9.06	61.36
HORVU3Hr1G020270.1	Barley	extracellular, peroxisome	12.42	52.11
HORVU4Hr1G074340.1	Barley	extracellular, peroxisome	11.07	46.48
HORVU4Hr1G083900.1	Barley	cytosol, mitochondrion, plastid	17.11	36.69
EES03512	Sorghum	cytosol	32.89	31.01
HORVU4Hr1G036900.1	Barley	cytosol, extracellular, mitochondrion	14.77	29.53
GSMUA_Achr3P32380_001	Banana	cytosol	18.46	26.7
Zm00001d011710_P001	Maize	cytosol, extracellular	27.85	26.6
TraesCS3A01G249300.1	Wheat	cytosol	27.52	26.45
HORVU3Hr1G067290.1	Barley	cytosol	27.52	26.45
TraesCS3B01G278200.1	Wheat	cytosol	27.52	26.45
Os06t0611600-00	Rice	mitochondrion	18.46	26.19
TraesCS3D01G249300.1	Wheat	cytosol	27.18	26.13
Os01t0712700-01	Rice	cytosol	27.18	25.96
AT4G29650.1	Thale cress	cytosol	20.13	23.9
GSMUA_Achr7P24040_001	Banana	cytosol	22.48	23.59
Bra039004.1-P	Field mustard	cytosol	22.82	23.21
CDY58323	Canola	cytosol	22.82	23.13
CDY65102	Canola	cytosol	22.82	23.13
CDY30209	Canola	cytosol	22.48	23.1
Bra024140.1-P	Field mustard	cytosol	23.15	22.48
CDY54276	Canola	cytosol	22.82	21.73
KRH63089	Soybean	cytosol	13.42	21.51
KRH49056	Soybean	plastid	19.8	21.22
AT2G19570.1	Thale cress	cytosol	21.14	20.93
AT4G29610.1	Thale cress	cytosol	20.47	20.82
KRH60135	Soybean	cytosol	20.13	20.48
VIT_11s0016g02340.t01	Wine grape	cytosol	20.81	20.2
CDY54269	Canola	cytosol	18.46	19.71
CDY30210	Canola	cytosol	18.46	19.71
Bra024141.1-P	Field mustard	cytosol	18.46	19.71
AT4G29570.1	Thale cress	cytosol	18.79	19.11
AT4G29600.1	Thale cress	cytosol	19.46	18.89
KRH41424	Soybean	plasma membrane	17.11	18.41
PGSC0003DMT400020044	Potato	cytosol	19.8	18.21
Solyc07g021750.1.1	Tomato	cytosol	19.8	18.1
AT4G29630.1	Thale cress	cytosol	13.42	17.94
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, golgi	23.83	17.93
AT4G29620.1	Thale cress	cytosol	19.13	16.91
CDY54272	Canola	cytosol	14.77	15.77
AT4G29640.1	Thale cress	cytosol	18.12	15.61
CDY54275	Canola	mitochondrion	14.77	15.38
AT4G29580.2	Thale cress	nucleus	18.46	12.36

Protein Annotations

Gene3D:3.40.140.10	MapMan:6.2.4.2	UniProt:A0A1Z5S7K8	InterPro:Cytidine_deaminase-like	GO:GO:0003674	GO:GO:0003824
GO:GO:0004126	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056
GO:GO:0009972	GO:GO:0009987	GO:GO:0016787	EnsemblPlants:OQU91901	ProteinID:OQU91901	ProteinID:OQU91901.1
PANTHER:PTHR11644	PANTHER:PTHR11644:SF2	EnsemblPlantsGene:SORBI_3001G261480	SUPFAM:SSF53927	UniParc:UPI000B8B990F	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:35477269..35483436

Molecular Weight (calculated)

32161.4 Da

IEP (calculated)

8.957

GRAVY (calculated)

-0.208

Length

298 amino acids

Sequence
(BLAST)

001: MAGERPPIPF RDLQVPRRRW RRGRSVSPLP FARVPISVFR VGAVGLGASG RVYVGVSVEF HGVPLCHSVH AEQFLVANAA AAGGVRAARR RRLPHALRPL
101: PPVPLGDPHR GGHAEQGLAP EWRTVASLLL HPFEAHNDAL GDPVVAAAAN GVAPGDLDAC GGASREGITG LGRTHGEVRR GDVHEGAHQE QVAADQHHGL
201: APQAPGDAAR QQRPHHAERI QRQREGRQRL VVVDAVHVLV AAARRALEQA WEELLQESLH LRHTSWTLLQ VATDGATEFI CSMSVLVFSV FYLLDGDA

Best Arabidopsis Sequence Match ( AT4G29620.1 )
(BLAST)

001: MAQRPNLLSH LQDLVTKFKN MTMAQDRFKF VFTANEAALE GVTDPIRLPN LIRKAMCLAR APISKYKVGA VGRASSGRVY LGVNVDFPGL PLHHSIHAEQ
101: FLVTNLALNY EKDLCKLAVA ISTDGLEFGT PCGNCLQFLM EMSNALDMKI LSKPKHEAGS FSSLRLLLPN VLPKGSPFLL EKRYNCLTLS GSAGEICSLD
201: CSHLKRRALA AANNSFSPYT ESPSGVALLD NDGNWYRGWY IESVASNPSL GPVQAALVDF VARSRGKMFN KIVQAVLVEK NNASVSQERT AKIILDTIAP
301: NCDFKVFHCS VDCAKRLKYL RETLVIDTLG DYTGLHY

Arabidopsis Description

CDA2Cytidine deaminase 2 [Source:UniProtKB/Swiss-Prot;Acc:O65571]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.