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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30209 Canola cytosol 90.73 97.93
Bra024140.1-P Field mustard cytosol 92.01 93.81
CDY58323 Canola cytosol 72.2 76.87
CDY65102 Canola cytosol 71.57 76.19
HORVU3Hr1G020270.1 Barley extracellular, peroxisome 14.06 61.97
VIT_11s0016g02340.t01 Wine grape cytosol 59.42 60.59
HORVU4Hr1G074340.1 Barley extracellular, peroxisome 13.74 60.56
KRH60135 Soybean cytosol 56.55 60.41
KRH49056 Soybean plastid 53.35 60.07
CDY30210 Canola cytosol 53.35 59.86
CDY54269 Canola cytosol 52.72 59.14
HORVU5Hr1G034090.1 Barley mitochondrion 8.31 59.09
HORVU5Hr1G075600.1 Barley mitochondrion 8.31 59.09
KRH41424 Soybean plasma membrane 52.08 58.84
GSMUA_Achr7P24040_001 Banana cytosol 50.8 55.99
GSMUA_Achr3P32380_001 Banana cytosol 35.78 54.37
HORVU4Hr1G083900.1 Barley cytosol, mitochondrion, plastid 23.32 52.52
PGSC0003DMT400020044 Potato cytosol 54.31 52.47
Solyc07g021750.1.1 Tomato cytosol 53.67 51.53
KRH63089 Soybean cytosol 30.35 51.08
HORVU3Hr1G067290.1 Barley cytosol 48.88 49.35
Zm00001d011710_P001 Maize cytosol, extracellular 48.56 48.72
TraesCS3D01G249300.1 Wheat cytosol 48.24 48.71
TraesCS3B01G278200.1 Wheat cytosol 48.24 48.71
TraesCS3A01G249300.1 Wheat cytosol 48.24 48.71
Os01t0712700-01 Rice cytosol 47.92 48.08
Zm00001d043674_P001 Maize cytosol 48.24 47.78
HORVU4Hr1G036900.1 Barley cytosol, extracellular, mitochondrion 22.04 46.31
EES03512 Sorghum cytosol 46.65 46.2
CDY54272 Canola cytosol 40.58 45.52
Os06t0611600-00 Rice mitochondrion 30.35 45.24
CDY54275 Canola mitochondrion 38.02 41.61
GSMUA_AchrUn_... Banana cytosol, endoplasmic reticulum, golgi 44.41 35.1
OQU91901 Sorghum cytosol, plastid 21.73 22.82
Protein Annotations
KEGG:00240+3.5.4.5KEGG:00983+3.5.4.5Gene3D:3.40.140.10MapMan:6.2.4.2GO:A0A078IW90UniProt:A0A078IW90
InterPro:APOBEC/CMP_deaminase_Zn-bdEnsemblPlants:CDY54276ProteinID:CDY54276ProteinID:CDY54276.1InterPro:CMP_dCMP_domncoils:Coil
InterPro:Cyd/dCyd_deaminase_Zn-bdInterPro:Cyt_deam_dimerInterPro:Cytidine_deaminase-likeGO:GO:0003674GO:GO:0003824GO:GO:0004126
GO:GO:0005488GO:GO:0006139GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009056
GO:GO:0009972GO:GO:0009987GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00013753001InterPro:IPR002125PFAM:PF00383
PFAM:PF08211PIRSF:PIRSF006334ScanProsite:PS00903PFscan:PS51747PANTHER:PTHR11644PANTHER:PTHR11644:SF2
MetaCyc:PWY-6556MetaCyc:PWY-7181MetaCyc:PWY-7193MetaCyc:PWY-7199SUPFAM:SSF53927TIGRFAMs:TIGR01355
UniParc:UPI0004EECBD0SEG:seg::::
Description
BnaC07g50780DBnaC07g50780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW90]
Coordinates
chrLK033298:+:31365..32616
Molecular Weight (calculated)
34173.6 Da
IEP (calculated)
5.918
GRAVY (calculated)
-0.162
Length
313 amino acids
Sequence
(BLAST)
001: MDRPSFLIHA EEAESAAKRH GVSVVNLLPL LVNPAKPLAR PPISKFPVAA VGLGSSGRIF VGVNVEFPGL PLHHSIHAEQ FLVANLTLNS EPNLRHFSVS
101: AAPCGHCRQF LQEIRDAPDI KILITDPNAF RDAVNENEND ANENDAVKNE NDAVKNKEED GYVRLESILP HRFGPNDLLE RDVPLLLEPH DNRLTILGVT
201: NGHTDSDLKL TALAAANRSY APYSRCPSGV ALVDCEGRVY RGWYMESAAY NPSLGPVQAA LVDFVANGGG GGFERIVGAV LVEKRDAVVR QEHTARMLLQ
301: VIAPKCDFEV FHC
Best Arabidopsis Sequence Match ( AT2G19570.1 )
(BLAST)
001: MDKPSFVIQS KEAESAAKQL GVSVIQLLPS LVKPAQSYAR TPISKFNVAV VGLGSSGRIF LGVNVEFPNL PLHHSIHAEQ FLVTNLTLNG ERHLNFFAVS
101: AAPCGHCRQF LQEIRDAPEI KILITDPNNS ADSDSAADSD GFLRLGSFLP HRFGPDDLLG KDHPLLLESH DNHLKISDLD SICNGNTDSS ADLKQTALAA
201: ANRSYAPYSL CPSGVSLVDC DGKVYRGWYM ESAAYNPSMG PVQAALVDYV ANGGGGGYER IVGAVLVEKE DAVVRQEHTA RLLLETISPK CEFKVFHCYE
301: A
Arabidopsis Description
CDA1Cytidine deaminase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65896]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.