CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY54272	Canola	cytosol	65.73	67.38
CDY30210	Canola	cytosol	40.56	41.58
CDY54269	Canola	cytosol	39.86	40.86
CDY30209	Canola	cytosol	41.26	40.69
CDY58323	Canola	cytosol	40.91	39.8
CDY65102	Canola	cytosol	40.91	39.8
AT4G29570.1	Thale cress	cytosol	39.86	38.91
HORVU3Hr1G020270.1	Barley	extracellular, peroxisome	9.44	38.03
CDY54276	Canola	cytosol	41.61	38.02
KRH49056	Soybean	plastid	36.71	37.77
HORVU4Hr1G074340.1	Barley	extracellular, peroxisome	9.09	36.62
KRH41424	Soybean	plasma membrane	34.97	36.1
VIT_11s0016g02340.t01	Wine grape	cytosol	37.06	34.53
KRH60135	Soybean	cytosol	35.31	34.47
HORVU4Hr1G083900.1	Barley	cytosol, mitochondrion, plastid	15.73	32.37
Solyc07g021750.1.1	Tomato	cytosol	36.71	32.21
GSMUA_Achr7P24040_001	Banana	cytosol	31.47	31.69
PGSC0003DMT400020044	Potato	cytosol	35.66	31.48
HORVU4Hr1G036900.1	Barley	cytosol, extracellular, mitochondrion	16.08	30.87
Os06t0611600-00	Rice	mitochondrion	22.03	30.0
HORVU5Hr1G034090.1	Barley	mitochondrion	4.55	29.55
HORVU5Hr1G075600.1	Barley	mitochondrion	4.55	29.55
Zm00001d011710_P001	Maize	cytosol, extracellular	31.47	28.85
Os01t0712700-01	Rice	cytosol	31.12	28.53
KRH63089	Soybean	cytosol	18.53	28.49
HORVU3Hr1G067290.1	Barley	cytosol	30.77	28.39
GSMUA_Achr3P32380_001	Banana	cytosol	20.28	28.16
TraesCS3B01G278200.1	Wheat	cytosol	30.42	28.06
Zm00001d043674_P001	Maize	cytosol	30.77	27.85
EES03512	Sorghum	cytosol	30.77	27.85
TraesCS3A01G249300.1	Wheat	cytosol	30.07	27.74
TraesCS3D01G249300.1	Wheat	cytosol	30.07	27.74
AT4G29580.2	Thale cress	nucleus	39.16	25.17
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, golgi	24.83	17.93
OQU91901	Sorghum	cytosol, plastid	15.38	14.77

Protein Annotations

KEGG:00240+3.5.4.5	KEGG:00983+3.5.4.5	Gene3D:3.40.140.10	MapMan:6.2.4.2	GO:A0A078IT06	UniProt:A0A078IT06
EnsemblPlants:CDY54275	ProteinID:CDY54275	ProteinID:CDY54275.1	InterPro:CMP_dCMP_dom	InterPro:Cyd/dCyd_deaminase_Zn-bd	InterPro:Cytidine_deaminase-like
GO:GO:0003674	GO:GO:0003824	GO:GO:0004126	GO:GO:0005488	GO:GO:0006139	GO:GO:0008150
GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009972	GO:GO:0009987	GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00013752001	InterPro:IPR002125	PFAM:PF08211	PIRSF:PIRSF006334	PFscan:PS51747	PANTHER:PTHR11644
PANTHER:PTHR11644:SF2	MetaCyc:PWY-6556	MetaCyc:PWY-7181	MetaCyc:PWY-7193	MetaCyc:PWY-7199	SUPFAM:SSF53927
UniParc:UPI0004EDBDE7	:	:	:	:	:

Description

BnaC07g50770DBnaC07g50770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT06]

Coordinates

chrLK033298:+:28556..29416

Molecular Weight (calculated)

31840.1 Da

IEP (calculated)

7.581

GRAVY (calculated)

-0.056

Length

286 amino acids

Sequence
(BLAST)

001: MLGYYFGFIR SRNVDAFSQQ NLHSLITEAT PLAQSLTSKR RPHIAIGRGS NGLTYVGFDV ELPDLPLNFS IHAVQFLVVS LKLNFDLALR DLAISNDGSH
101: CYAPCGHCCQ FLQEINKGNE IQTLITEPTG SGFMPLEMLL PQSFSRYSAI SDDVPDVFHR RYPLTFIDRS HDLIGLTAMT AARNSYAPYS NAPSGVVLYD
201: RQGHKFSGSY IESVAAFPSL GPLQAVLVNF VIDTGGREFK NIVVAVLVET RSRFRQEDTA RMIMQKIAPG CKFNVYHCSH YRAESS

Best Arabidopsis Sequence Match ( AT4G29570.1 )
(BLAST)

001: MAQPMRFMLN HIETESYGAF TPQNLSPLIN RAIPHTRAQI SGSPVVAVGR GSSGRTFFGV NVELPGLPLD HSIHAEQFLL ANLALHFEQK LECIAISTNG
101: YYFQEPCGHC CQLLHKIRDM SDTKILLTNP TGQKGTYMNL STFLPQGLIS QANVPRLLER NFNCIELINH SLYMDICSYS EHCNHLNCRA LKAATISYAP
201: DSKCPSGVAL IDHRGKVYSG GYMESVAHNT SLGPVQAALV DFVANGDGQE FKNIVEAVLV EKKCGVLSQE ATARMILEKI ADPDCIFRVL HCK

Arabidopsis Description

CDA8Cytidine deaminase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEX4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.