Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54275 | Canola | mitochondrion | 67.38 | 65.73 |
| CDY54269 | Canola | cytosol | 44.8 | 44.8 |
| CDY30210 | Canola | cytosol | 44.09 | 44.09 |
| CDY30209 | Canola | cytosol | 44.8 | 43.1 |
| CDY65102 | Canola | cytosol | 45.16 | 42.86 |
| CDY58323 | Canola | cytosol | 44.8 | 42.52 |
| HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 10.75 | 42.25 |
| AT4G29570.1 | Thale cress | cytosol | 44.09 | 41.98 |
| CDY54276 | Canola | cytosol | 45.52 | 40.58 |
| KRH49056 | Soybean | plastid | 39.43 | 39.57 |
| HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 10.04 | 39.44 |
| KRH41424 | Soybean | plasma membrane | 38.71 | 38.99 |
| VIT_11s0016g02340.t01 | Wine grape | cytosol | 40.5 | 36.81 |
| KRH60135 | Soybean | cytosol | 37.63 | 35.84 |
| HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 17.2 | 34.53 |
| GSMUA_Achr7P24040_001 | Banana | cytosol | 35.13 | 34.51 |
| GSMUA_Achr3P32380_001 | Banana | cytosol | 25.45 | 34.47 |
| KRH63089 | Soybean | cytosol | 22.58 | 33.87 |
| HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 17.56 | 32.89 |
| PGSC0003DMT400020044 | Potato | cytosol | 37.28 | 32.1 |
| Solyc07g021750.1.1 | Tomato | cytosol | 37.28 | 31.9 |
| HORVU5Hr1G075600.1 | Barley | mitochondrion | 5.02 | 31.82 |
| HORVU5Hr1G034090.1 | Barley | mitochondrion | 5.02 | 31.82 |
| Os01t0712700-01 | Rice | cytosol | 35.13 | 31.41 |
| Zm00001d043674_P001 | Maize | cytosol | 35.48 | 31.33 |
| HORVU3Hr1G067290.1 | Barley | cytosol | 34.41 | 30.97 |
| TraesCS3B01G278200.1 | Wheat | cytosol | 34.41 | 30.97 |
| Os06t0611600-00 | Rice | mitochondrion | 23.3 | 30.95 |
| EES03512 | Sorghum | cytosol | 34.77 | 30.7 |
| TraesCS3A01G249300.1 | Wheat | cytosol | 34.05 | 30.65 |
| Zm00001d011710_P001 | Maize | cytosol, extracellular | 34.05 | 30.45 |
| TraesCS3D01G249300.1 | Wheat | cytosol | 33.69 | 30.32 |
| AT4G29580.2 | Thale cress | nucleus | 45.16 | 28.31 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 29.75 | 20.96 |
| OQU91901 | Sorghum | cytosol, plastid | 15.77 | 14.77 |
Protein Annotations
| KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | MapMan:6.2.4.2 | GO:A0A078IW92 | UniProt:A0A078IW92 |
| InterPro:APOBEC/CMP_deaminase_Zn-bd | EnsemblPlants:CDY54272 | ProteinID:CDY54272 | ProteinID:CDY54272.1 | InterPro:CMP_dCMP_dom | InterPro:Cyd/dCyd_deaminase_Zn-bd |
| InterPro:Cytidine_deaminase-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004126 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009972 | GO:GO:0009987 |
| GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00013749001 | InterPro:IPR002125 | PFAM:PF08211 | PIRSF:PIRSF006334 | ScanProsite:PS00903 |
| PFscan:PS51747 | PANTHER:PTHR11644 | PANTHER:PTHR11644:SF2 | MetaCyc:PWY-6556 | MetaCyc:PWY-7181 | MetaCyc:PWY-7193 |
| MetaCyc:PWY-7199 | SUPFAM:SSF53927 | UniParc:UPI0004EDF57D | : | : | : |
Description
BnaC07g50740DBnaC07g50740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IW92]
Coordinates
chrLK033298:+:12837..13676
Molecular Weight (calculated)
30468.2 Da
IEP (calculated)
4.690
GRAVY (calculated)
-0.089
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MEENFVLSPT RNVDAFSQQN LHSLITEATP LAQSLTSNTP YIAIGRGSSD QIYLGFDVEL PDLPLNFSIH AEQFLVVNLT SNQEPKLRDL AISNDGSHCY
101: APCGHCCQFL QEINKGNEIQ TLITEPTGPR FMPLEMLLPQ SFSRYSTISD DVPDVLLLRD NGLTLKNSYG VFKEMALAAA NRSYAPHSNA PSGVVLCDRG
201: GKMYSGSYLE SVADIPSLGP LQAALVNFVI DTGGREFKNI VVAVLVETRS SFPQADTAKM IIQKIAPECS FNAYHAQSS
101: APCGHCCQFL QEINKGNEIQ TLITEPTGPR FMPLEMLLPQ SFSRYSTISD DVPDVLLLRD NGLTLKNSYG VFKEMALAAA NRSYAPHSNA PSGVVLCDRG
201: GKMYSGSYLE SVADIPSLGP LQAALVNFVI DTGGREFKNI VVAVLVETRS SFPQADTAKM IIQKIAPECS FNAYHAQSS
001: MAQPPNPYAA LTPTEAESSG PFEPETLLPL INRALPLAQA LPSQSPLVAV GRGSSGRTFL GVNVELPGLS PLHSIHAGQF LVVHLALNNE RTLNCLAFSS
101: NGSYFDPPCP HCCQLLQEIR NASSTKLLIT DPSRQRDMSL STYLPQKYLS LYNEVPKYFF ARLLDENRNN GLTLINPNPI RDCLDSEICN HLSCRALKAA
201: NRSYAPYSKS PSGVALMDFQ GRVYSGWSIE SVANPILGAA QAALVDFMTN GGGHEFNNIV RGFLVEKRDA KLSHLATARE ILNKVAHFSF ILRVLHCQ
101: NGSYFDPPCP HCCQLLQEIR NASSTKLLIT DPSRQRDMSL STYLPQKYLS LYNEVPKYFF ARLLDENRNN GLTLINPNPI RDCLDSEICN HLSCRALKAA
201: NRSYAPYSKS PSGVALMDFQ GRVYSGWSIE SVANPILGAA QAALVDFMTN GGGHEFNNIV RGFLVEKRDA KLSHLATARE ILNKVAHFSF ILRVLHCQ
Arabidopsis Description
Cytidine/deoxycytidylate deaminase family protein [Source:UniProtKB/TrEMBL;Acc:F4JNN8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.