Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58323 | Canola | cytosol | 97.96 | 97.96 |
| Bra039004.1-P | Field mustard | cytosol | 97.28 | 97.61 |
| AT2G19570.1 | Thale cress | cytosol | 84.01 | 82.06 |
| CDY30209 | Canola | cytosol | 76.53 | 77.59 |
| CDY54276 | Canola | cytosol | 76.19 | 71.57 |
| HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 14.97 | 61.97 |
| VIT_11s0016g02340.t01 | Wine grape | cytosol | 63.95 | 61.24 |
| HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 14.29 | 59.15 |
| HORVU5Hr1G075600.1 | Barley | mitochondrion | 8.84 | 59.09 |
| HORVU5Hr1G034090.1 | Barley | mitochondrion | 8.84 | 59.09 |
| KRH49056 | Soybean | plastid | 55.44 | 58.63 |
| KRH60135 | Soybean | cytosol | 57.82 | 58.02 |
| CDY30210 | Canola | cytosol | 54.76 | 57.71 |
| KRH41424 | Soybean | plasma membrane | 53.74 | 57.04 |
| CDY54269 | Canola | cytosol | 53.74 | 56.63 |
| GSMUA_Achr7P24040_001 | Banana | cytosol | 52.72 | 54.58 |
| HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 24.83 | 52.52 |
| PGSC0003DMT400020044 | Potato | cytosol | 57.82 | 52.47 |
| Solyc07g021750.1.1 | Tomato | cytosol | 58.16 | 52.45 |
| GSMUA_Achr3P32380_001 | Banana | cytosol | 34.69 | 49.51 |
| HORVU3Hr1G067290.1 | Barley | cytosol | 50.68 | 48.06 |
| KRH63089 | Soybean | cytosol | 30.27 | 47.85 |
| TraesCS3A01G249300.1 | Wheat | cytosol | 50.34 | 47.74 |
| Os01t0712700-01 | Rice | cytosol | 50.34 | 47.44 |
| TraesCS3D01G249300.1 | Wheat | cytosol | 50.0 | 47.42 |
| TraesCS3B01G278200.1 | Wheat | cytosol | 50.0 | 47.42 |
| HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 23.47 | 46.31 |
| Zm00001d011710_P001 | Maize | cytosol, extracellular | 48.98 | 46.15 |
| Zm00001d043674_P001 | Maize | cytosol | 48.98 | 45.57 |
| CDY54272 | Canola | cytosol | 42.86 | 45.16 |
| Os06t0611600-00 | Rice | mitochondrion | 31.97 | 44.76 |
| EES03512 | Sorghum | cytosol | 47.96 | 44.62 |
| CDY54275 | Canola | mitochondrion | 39.8 | 40.91 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 45.58 | 33.84 |
| OQU91901 | Sorghum | cytosol, plastid | 23.13 | 22.82 |
Protein Annotations
| KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | MapMan:6.2.4.2 | GO:A0A078JI81 | UniProt:A0A078JI81 |
| InterPro:APOBEC/CMP_deaminase_Zn-bd | EnsemblPlants:CDY65102 | ProteinID:CDY65102 | ProteinID:CDY65102.1 | InterPro:CMP_dCMP_dom | InterPro:Cyd/dCyd_deaminase_Zn-bd |
| InterPro:Cyt_deam_dimer | InterPro:Cytidine_deaminase-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004126 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 | GO:GO:0009056 | GO:GO:0009972 |
| GO:GO:0009987 | GO:GO:0016787 | EnsemblPlantsGene:GSBRNA2T00044170001 | InterPro:IPR002125 | PFAM:PF00383 | PFAM:PF08211 |
| PIRSF:PIRSF006334 | ScanProsite:PS00903 | PFscan:PS51747 | PANTHER:PTHR11644 | PANTHER:PTHR11644:SF2 | MetaCyc:PWY-6556 |
| MetaCyc:PWY-7181 | MetaCyc:PWY-7193 | MetaCyc:PWY-7199 | SUPFAM:SSF53927 | TIGRFAMs:TIGR01355 | UniParc:UPI0004EDF928 |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng20200DBnaAnng20200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JI81]
Coordinates
chrLK034657:+:13176..14228
Molecular Weight (calculated)
31878.0 Da
IEP (calculated)
5.938
GRAVY (calculated)
-0.058
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKPSFVISP EQAESAANQL GVSVLQLLPS LVNPAKSFAR PPISKFHVGA VGLGSSGRIF LGVNVEFPGL PLHHSIHAEQ FLVTNLTLNG ERHLRNFAVS
101: AAPCGHCRQF LQEIRDASEI RLVITDPNAT ADPDADSDGF LRLGSILPHR FGPEDLLEKD FPLILERHDN NLTISDLDPI SNGNTVELKR TALAAANRSY
201: APYSLCPSGV ALVDCDGKVY RGWYMESAAY NPSLGPLQAA LVDYIANGGG GGYERIVGAV LVEKEDAVVR QEHTARLLIQ MISPKCDFSV YHCH
101: AAPCGHCRQF LQEIRDASEI RLVITDPNAT ADPDADSDGF LRLGSILPHR FGPEDLLEKD FPLILERHDN NLTISDLDPI SNGNTVELKR TALAAANRSY
201: APYSLCPSGV ALVDCDGKVY RGWYMESAAY NPSLGPLQAA LVDYIANGGG GGYERIVGAV LVEKEDAVVR QEHTARLLIQ MISPKCDFSV YHCH
001: MDKPSFVIQS KEAESAAKQL GVSVIQLLPS LVKPAQSYAR TPISKFNVAV VGLGSSGRIF LGVNVEFPNL PLHHSIHAEQ FLVTNLTLNG ERHLNFFAVS
101: AAPCGHCRQF LQEIRDAPEI KILITDPNNS ADSDSAADSD GFLRLGSFLP HRFGPDDLLG KDHPLLLESH DNHLKISDLD SICNGNTDSS ADLKQTALAA
201: ANRSYAPYSL CPSGVSLVDC DGKVYRGWYM ESAAYNPSMG PVQAALVDYV ANGGGGGYER IVGAVLVEKE DAVVRQEHTA RLLLETISPK CEFKVFHCYE
301: A
101: AAPCGHCRQF LQEIRDAPEI KILITDPNNS ADSDSAADSD GFLRLGSFLP HRFGPDDLLG KDHPLLLESH DNHLKISDLD SICNGNTDSS ADLKQTALAA
201: ANRSYAPYSL CPSGVSLVDC DGKVYRGWYM ESAAYNPSMG PVQAALVDYV ANGGGGGYER IVGAVLVEKE DAVVRQEHTA RLLLETISPK CEFKVFHCYE
301: A
Arabidopsis Description
CDA1Cytidine deaminase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65896]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.