Factsheet for Bra039004.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65102	Canola	cytosol	97.61	97.28
AT2G19570.1	Thale cress	cytosol	83.28	81.06
Bra024140.1-P	Field mustard	cytosol	75.43	71.99
HORVU3Hr1G020270.1	Barley	extracellular, peroxisome	15.02	61.97
VIT_11s0016g02340.t01	Wine grape	cytosol	64.51	61.56
HORVU4Hr1G074340.1	Barley	extracellular, peroxisome	14.33	59.15
HORVU5Hr1G075600.1	Barley	mitochondrion	8.87	59.09
HORVU5Hr1G034090.1	Barley	mitochondrion	8.87	59.09
Bra024141.1-P	Field mustard	cytosol	55.29	58.06
KRH60135	Soybean	cytosol	58.02	58.02
KRH49056	Soybean	plastid	54.95	57.91
KRH41424	Soybean	plasma membrane	53.92	57.04
GSMUA_Achr7P24040_001	Banana	cytosol	53.92	55.63
PGSC0003DMT400020044	Potato	cytosol	58.36	52.78
HORVU4Hr1G083900.1	Barley	cytosol, mitochondrion, plastid	24.91	52.52
Solyc07g021750.1.1	Tomato	cytosol	57.68	51.84
GSMUA_Achr3P32380_001	Banana	cytosol	35.49	50.49
TraesCS3A01G249300.1	Wheat	cytosol	51.54	48.71
Os01t0712700-01	Rice	cytosol	51.54	48.4
HORVU3Hr1G067290.1	Barley	cytosol	51.19	48.39
TraesCS3D01G249300.1	Wheat	cytosol	51.19	48.39
TraesCS3B01G278200.1	Wheat	cytosol	51.19	48.39
KRH63089	Soybean	cytosol	30.38	47.85
Zm00001d011710_P001	Maize	cytosol, extracellular	49.49	46.47
HORVU4Hr1G036900.1	Barley	cytosol, extracellular, mitochondrion	23.55	46.31
Zm00001d043674_P001	Maize	cytosol	49.15	45.57
Os06t0611600-00	Rice	mitochondrion	32.42	45.24
EES03512	Sorghum	cytosol	48.12	44.62
GSMUA_AchrUn_...	Banana	cytosol, endoplasmic reticulum, golgi	45.39	33.59
OQU91901	Sorghum	cytosol, plastid	23.21	22.82

Protein Annotations

KEGG:00240+3.5.4.5	KEGG:00983+3.5.4.5	Gene3D:3.40.140.10	MapMan:6.2.4.2	InterPro:APOBEC/CMP_deaminase_Zn-bd	EnsemblPlantsGene:Bra039004
EnsemblPlants:Bra039004.1	EnsemblPlants:Bra039004.1-P	InterPro:CMP_dCMP_dom	InterPro:Cyd/dCyd_deaminase_Zn-bd	InterPro:Cyt_deam_dimer	InterPro:Cytidine_deaminase-like
GO:GO:0003674	GO:GO:0003824	GO:GO:0004126	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006139	GO:GO:0006216
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009972	GO:GO:0009987
GO:GO:0016787	GO:GO:0042803	GO:GO:0047844	InterPro:IPR002125	UniProt:M4FD34	PFAM:PF00383
PFAM:PF08211	PIRSF:PIRSF006334	ScanProsite:PS00903	PFscan:PS51747	PANTHER:PTHR11644	PANTHER:PTHR11644:SF2
SUPFAM:SSF53927	TIGRFAMs:TIGR01355	UniParc:UPI0002541010	SEG:seg	:	:

Description

AT2G19570 (E=2e-132) CDA1, AT-CDA1, DESZ | CDA1 (CYTIDINE DEAMINASE 1); cytidine deaminase

Coordinates

chrA07:+:861931..862812

Molecular Weight (calculated)

31788.8 Da

IEP (calculated)

5.709

GRAVY (calculated)

-0.050

Length

293 amino acids

Sequence
(BLAST)

001: MDKPSFVISP EEAESAANQL GVSVLQLLPS LVNPAKSFAR PPISKFHVGA VGLGSSGRIF LGVNVEFPGL PLHHSIHAEQ FLVTNLTLNG ERHLRNFAVS
101: AAPCGHCRQF LQEIRDASEI RLVITDPNAT ADPDADSDGF LRLGSILPHR FGPEDLLEKD FPLILEHHDN NLTISDLDPI SNGNTVELKR TALAAANRSY
201: APYSLCPSGV ALVDCEGKVY RGWYMESAAY NPSLGPVQAA LVDYIANGGG GYERIVGAVV VEKEDAVVRQ EHTARLLIQM ISPKCDFSVY HCH

Best Arabidopsis Sequence Match ( AT2G19570.1 )
(BLAST)

001: MDKPSFVIQS KEAESAAKQL GVSVIQLLPS LVKPAQSYAR TPISKFNVAV VGLGSSGRIF LGVNVEFPNL PLHHSIHAEQ FLVTNLTLNG ERHLNFFAVS
101: AAPCGHCRQF LQEIRDAPEI KILITDPNNS ADSDSAADSD GFLRLGSFLP HRFGPDDLLG KDHPLLLESH DNHLKISDLD SICNGNTDSS ADLKQTALAA
201: ANRSYAPYSL CPSGVSLVDC DGKVYRGWYM ESAAYNPSMG PVQAALVDYV ANGGGGGYER IVGAVLVEKE DAVVRQEHTA RLLLETISPK CEFKVFHCYE
301: A

Arabidopsis Description

CDA1Cytidine deaminase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65896]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.