Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G020270.1 | Barley | extracellular, peroxisome | 12.63 | 52.11 |
| HORVU4Hr1G074340.1 | Barley | extracellular, peroxisome | 12.29 | 50.7 |
| AT4G29610.1 | Thale cress | cytosol | 46.42 | 46.42 |
| HORVU5Hr1G034090.1 | Barley | mitochondrion | 6.83 | 45.45 |
| HORVU5Hr1G075600.1 | Barley | mitochondrion | 6.83 | 45.45 |
| AT4G29650.1 | Thale cress | cytosol | 37.88 | 44.22 |
| CDY54272 | Canola | cytosol | 41.98 | 44.09 |
| AT2G19570.1 | Thale cress | cytosol | 44.71 | 43.52 |
| AT4G29600.1 | Thale cress | cytosol | 44.71 | 42.67 |
| KRH49056 | Soybean | plastid | 39.59 | 41.73 |
| VIT_11s0016g02340.t01 | Wine grape | cytosol | 43.69 | 41.69 |
| KRH41424 | Soybean | plasma membrane | 37.88 | 40.07 |
| KRH60135 | Soybean | cytosol | 39.93 | 39.93 |
| AT4G29630.1 | Thale cress | cytosol | 30.38 | 39.91 |
| CDY54275 | Canola | mitochondrion | 38.91 | 39.86 |
| AT4G29620.1 | Thale cress | cytosol | 44.71 | 38.87 |
| GSMUA_Achr7P24040_001 | Banana | cytosol | 37.54 | 38.73 |
| PGSC0003DMT400020044 | Potato | cytosol | 40.27 | 36.42 |
| AT4G29640.1 | Thale cress | cytosol | 43.0 | 36.42 |
| AT4G29580.2 | Thale cress | nucleus | 54.61 | 35.96 |
| Solyc07g021750.1.1 | Tomato | cytosol | 39.59 | 35.58 |
| HORVU4Hr1G083900.1 | Barley | cytosol, mitochondrion, plastid | 16.72 | 35.25 |
| HORVU3Hr1G067290.1 | Barley | cytosol | 36.52 | 34.52 |
| Os01t0712700-01 | Rice | cytosol | 36.52 | 34.29 |
| TraesCS3A01G249300.1 | Wheat | cytosol | 35.84 | 33.87 |
| TraesCS3B01G278200.1 | Wheat | cytosol | 35.84 | 33.87 |
| TraesCS3D01G249300.1 | Wheat | cytosol | 35.84 | 33.87 |
| Zm00001d011710_P001 | Maize | cytosol, extracellular | 35.84 | 33.65 |
| Zm00001d043674_P001 | Maize | cytosol | 35.49 | 32.91 |
| KRH63089 | Soybean | cytosol | 20.82 | 32.8 |
| GSMUA_Achr3P32380_001 | Banana | cytosol | 22.87 | 32.52 |
| Os06t0611600-00 | Rice | mitochondrion | 23.21 | 32.38 |
| EES03512 | Sorghum | cytosol | 34.81 | 32.28 |
| HORVU4Hr1G036900.1 | Barley | cytosol, extracellular, mitochondrion | 16.38 | 32.21 |
| GSMUA_AchrUn_... | Banana | cytosol, endoplasmic reticulum, golgi | 31.74 | 23.48 |
| OQU91901 | Sorghum | cytosol, plastid | 19.11 | 18.79 |
Protein Annotations
| KEGG:00240+3.5.4.5 | KEGG:00983+3.5.4.5 | Gene3D:3.40.140.10 | MapMan:6.2.4.2 | EntrezGene:829078 | ProteinID:AAD30441.1 |
| ProteinID:AAD39263.1 | ProteinID:AEE85646.1 | InterPro:APOBEC/CMP_deaminase_Zn-bd | ArrayExpress:AT4G29570 | EnsemblPlantsGene:AT4G29570 | RefSeq:AT4G29570 |
| TAIR:AT4G29570 | RefSeq:AT4G29570-TAIR-G | EnsemblPlants:AT4G29570.1 | TAIR:AT4G29570.1 | Unigene:At.31907 | ProteinID:CAB45317.1 |
| ProteinID:CAB79715.1 | InterPro:CMP_dCMP_dom | InterPro:Cyd/dCyd_deaminase_Zn-bd | InterPro:Cyt_deam_dimer | InterPro:Cytidine_deaminase-like | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004126 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009056 | GO:GO:0009972 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046872 | InterPro:IPR002125 |
| RefSeq:NP_194686.1 | PFAM:PF00383 | PFAM:PF08211 | PIRSF:PIRSF006334 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0009029 | ScanProsite:PS00903 | PFscan:PS51747 | PANTHER:PTHR11644 | PANTHER:PTHR11644:SF2 | UniProt:Q9XEX4 |
| SUPFAM:SSF53927 | TIGRFAMs:TIGR01355 | UniParc:UPI0000048A17 | : | : | : |
Description
CDA8Cytidine deaminase 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEX4]
Coordinates
chr4:+:14507347..14508482
Molecular Weight (calculated)
32278.0 Da
IEP (calculated)
7.122
GRAVY (calculated)
-0.045
Length
293 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQPMRFMLN HIETESYGAF TPQNLSPLIN RAIPHTRAQI SGSPVVAVGR GSSGRTFFGV NVELPGLPLD HSIHAEQFLL ANLALHFEQK LECIAISTNG
101: YYFQEPCGHC CQLLHKIRDM SDTKILLTNP TGQKGTYMNL STFLPQGLIS QANVPRLLER NFNCIELINH SLYMDICSYS EHCNHLNCRA LKAATISYAP
201: DSKCPSGVAL IDHRGKVYSG GYMESVAHNT SLGPVQAALV DFVANGDGQE FKNIVEAVLV EKKCGVLSQE ATARMILEKI ADPDCIFRVL HCK
101: YYFQEPCGHC CQLLHKIRDM SDTKILLTNP TGQKGTYMNL STFLPQGLIS QANVPRLLER NFNCIELINH SLYMDICSYS EHCNHLNCRA LKAATISYAP
201: DSKCPSGVAL IDHRGKVYSG GYMESVAHNT SLGPVQAALV DFVANGDGQE FKNIVEAVLV EKKCGVLSQE ATARMILEKI ADPDCIFRVL HCK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.