CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

plastid 2
cytosol 2
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH73532	Soybean	endoplasmic reticulum	95.25	95.25
KRH10574	Soybean	endoplasmic reticulum	88.02	88.36
VIT_06s0009g02790.t01	Wine grape	endoplasmic reticulum, vacuole	80.8	79.29
KRH43883	Soybean	endoplasmic reticulum	74.52	75.97
AT5G12200.1	Thale cress	vacuole	74.71	74.01
GSMUA_Achr7P21420_001	Banana	extracellular, vacuole	74.9	73.92
Solyc11g064920.1.1	Tomato	vacuole	74.33	73.22
CDX69698	Canola	vacuole	75.1	73.01
Bra008908.1-P	Field mustard	vacuole	74.9	72.96
Os01t0807900-01	Rice	endoplasmic reticulum, vacuole	71.48	69.76
VIT_13s0047g00920.t01	Wine grape	cytosol	13.12	69.7
TraesCS3D01G327500.2	Wheat	endoplasmic reticulum, extracellular	70.53	69.22
HORVU3Hr1G079000.23	Barley	endoplasmic reticulum, extracellular	70.53	68.96
TraesCS3A01G334000.2	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	70.34	68.77
TraesCS3B01G365000.2	Wheat	extracellular, golgi	70.15	68.72
OQU87726	Sorghum	vacuole	69.96	68.66
Zm00001d043152_P001	Maize	extracellular	69.2	67.66
CDX97175	Canola	vacuole	75.1	58.43
Zm00001d012711_P001	Maize	cytosol	9.89	50.98
KRH21460	Soybean	nucleus	20.34	20.9
KRH10853	Soybean	endoplasmic reticulum	20.34	20.86
KRH21462	Soybean	endoplasmic reticulum	19.77	20.27
KRH10854	Soybean	nucleus	19.96	20.11

Protein Annotations

EntrezGene:100781590	Gene3D:2.30.40.10	Gene3D:3.20.20.140	MapMan:6.2.4.4	EMBL:ACUP02008506	InterPro:Amidohydro-rel
EMBL:BT096065	UniProt:C6TEN9	EnsemblPlantsGene:GLYMA_14G036000	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0016787	GO:GO:0016810	InterPro:Hydantoinase/dihydroPyrase
InterPro:IPR011059	EnsemblPlants:KRH14595	ProteinID:KRH14595	ProteinID:KRH14595.1	InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase
PFAM:PF01979	PANTHER:PTHR11647	PANTHER:PTHR11647:SF1	SUPFAM:SSF51338	SUPFAM:SSF51556	SignalP:SignalP-noTM
TIGRFAMs:TIGR02033	UniParc:UPI0001B16D1F	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:2678945..2685696

Molecular Weight (calculated)

57680.5 Da

IEP (calculated)

6.310

GRAVY (calculated)

-0.059

Length

526 amino acids

Sequence
(BLAST)

001: MQFSITSQFL HIFSLTIFII ITSSLSQSSQ FCDAGTEIPS SKLLIKGGTV VNAQHHQIAD VYVEDGIIVA VNPNIMVGDD VTVIDATGKY VMPGGIDPHT
101: HLDMDVGFTA TVDDFFSGQA AALAGGTTMH IDFVIPLNGS LTAGFEDYEK KAKKSCMDYG FHMVITKWDE TVSREMELMV KEKGINSFKF FMAYKGILMI
201: NDELLLEGFK KCKSLGAVAM VHAENGDAVY EGQRKMIELG ITGPEGHALS RPAVLEGEAT ARAIRLADFV NTPLYVVHVM SIDAMEEIAK ARKAGQRVIG
301: EPIASGLALD ESWLWHPDFE IAAKYVMSPP IRKRGHDKAL QAALSTGVLQ LVGTDHCAFN STQKARGIDD FRKMPNGVNG IEERMHLVWD IMVESGQISV
401: TDYVRITSTE CAKIFNIYPR KGAVLPGSDA DIIILNPNSS FEMSAKSHHS RLDTNVYEGR RGKGKIEVTI AGGRVVWENN ELKVTPGTGR YIQMPPFSYL
501: FDGLDKKDAI YLNSLQAPVK RAKAST

Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)

001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

Arabidopsis Description

PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.