Factsheet for TraesCS3A01G334000.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	secretory
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G327500.2	Wheat	endoplasmic reticulum, extracellular	97.77	98.13
TraesCS3B01G365000.2	Wheat	extracellular, golgi	95.91	96.09
HORVU3Hr1G079000.23	Barley	endoplasmic reticulum, extracellular	93.12	93.12
Os01t0807900-01	Rice	endoplasmic reticulum, vacuole	88.66	88.5
OQU87726	Sorghum	vacuole	88.1	88.43
Zm00001d043152_P001	Maize	extracellular	87.36	87.36
GSMUA_Achr7P21420_001	Banana	extracellular, vacuole	75.09	75.8
VIT_06s0009g02790.t01	Wine grape	endoplasmic reticulum, vacuole	72.12	72.39
Bra008908.1-P	Field mustard	vacuole	72.12	71.85
AT5G12200.1	Thale cress	vacuole	70.82	71.75
CDX69698	Canola	vacuole	71.75	71.35
KRH10574	Soybean	endoplasmic reticulum	69.14	70.99
KRH14595	Soybean	endoplasmic reticulum	68.77	70.34
KRH73532	Soybean	endoplasmic reticulum	68.4	69.96
Solyc11g064920.1.1	Tomato	vacuole	69.33	69.85
Zm00001d012711_P001	Maize	cytosol	12.64	66.67
VIT_13s0047g00920.t01	Wine grape	cytosol	11.9	64.65
KRH43883	Soybean	endoplasmic reticulum	59.48	62.02
CDX97175	Canola	vacuole	71.19	56.66
TraesCS2A01G587900.1	Wheat	endoplasmic reticulum	21.93	23.37

Protein Annotations

Gene3D:2.30.40.10	Gene3D:3.20.20.140	MapMan:6.2.4.4	InterPro:Amidohydro-rel	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0016787	GO:GO:0016810
InterPro:Hydantoinase/dihydroPyrase	InterPro:IPR011059	InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase	PFAM:PF01979	PANTHER:PTHR11647
PANTHER:PTHR11647:SF1	SUPFAM:SSF51338	SUPFAM:SSF51556	SignalP:SignalP-noTM	TIGRFAMs:TIGR02033	EnsemblPlantsGene:TraesCS3A01G334000
EnsemblPlants:TraesCS3A01G334000.2	TIGR:cd01314	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr3A:+:579373335..579376720

Molecular Weight (calculated)

57690.1 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.109

Length

538 amino acids

Sequence
(BLAST)

001: MATPCRIRRL LVLLAAVAVA ASHPAHEFCA AAGGGGGGAG GCGGGGDGTR ILIKGGTMVN AHRAEEADVY IEDGVVVAVR PNIPVGDDNV KVIDATGKYV
101: MPGGIDPHTH LEMEFMGTVT IDDFYSGHAA ALAGGTTMHI DFVIPVNGNL TAGLESYKHK AEKSAMDYGF HMAITKWNDE VSREMEVMVK EHGINSFKFF
201: MAYKGSLMVT DDLLLQGLQK CKSLGALAMV HAENGDAVAE GQQRMIDLGI TGPEGHALSR PPVLEGEATS RAIRLAKFVN TPLYVVHVMS TDAMEEIAKA
301: KREGQRVIGE PVVSGLVLDD SWLWDPDFAT ASKYVMSPPI REAGHNKALQ AALSSGILQL VGTDHCTFNS TQKAFGSDDF RKIPNGVNGI EERMHIIWDS
401: MVETGKITVT DYVRVTSTEC AKIFNIYPRK GAILEGSDAD IIVLNPKRSF AMGTRTHHTR SDTNVYEGRK GKGMVEVTIS RGRVVWEDGN LNAVPGAGRY
501: VRTPPFGYLF DGLDKSDAVY RASLRAPVQR GEAAAAAA

Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)

001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

Arabidopsis Description

PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.