CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008908.1-P	Field mustard	vacuole	94.27	94.44
AT5G12200.1	Thale cress	vacuole	89.09	90.77
VIT_06s0009g02790.t01	Wine grape	endoplasmic reticulum, vacuole	77.82	78.54
Solyc11g064920.1.1	Tomato	vacuole	75.79	76.78
KRH10574	Soybean	endoplasmic reticulum	74.31	76.72
KRH14595	Soybean	endoplasmic reticulum	73.01	75.1
CDX97175	Canola	vacuole	93.35	74.7
KRH73532	Soybean	endoplasmic reticulum	72.27	74.33
GSMUA_Achr7P21420_001	Banana	extracellular, vacuole	73.01	74.11
Os01t0807900-01	Rice	endoplasmic reticulum, vacuole	72.64	72.91
TraesCS3D01G327500.2	Wheat	endoplasmic reticulum, extracellular	71.9	72.57
OQU87726	Sorghum	vacuole	71.72	72.39
TraesCS3B01G365000.2	Wheat	extracellular, golgi	71.53	72.07
TraesCS3A01G334000.2	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	71.35	71.75
Zm00001d043152_P001	Maize	extracellular	70.98	71.38
HORVU3Hr1G079000.23	Barley	endoplasmic reticulum, extracellular	70.98	71.38
KRH43883	Soybean	endoplasmic reticulum	63.96	67.05
VIT_13s0047g00920.t01	Wine grape	cytosol	11.65	63.64
Zm00001d012711_P001	Maize	cytosol	10.54	55.88
CDY68077	Canola	mitochondrion	5.55	28.3
CDY16634	Canola	endoplasmic reticulum, vacuole	19.41	20.87
CDY44735	Canola	extracellular, vacuole	19.41	20.83
CDX69699	Canola	cytosol	4.62	20.16
CDX78469	Canola	cytosol	4.44	19.35
CDX70451	Canola	cytosol	4.44	19.35

Protein Annotations

Gene3D:2.30.40.10	Gene3D:3.20.20.140	MapMan:6.2.4.4	GO:A0A078C3T9	InterPro:Amidohydro-rel	EnsemblPlants:CDX69698
ProteinID:CDX69698	ProteinID:CDX69698.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00135728001	InterPro:Hydantoinase/dihydroPyrase
InterPro:IPR011059	InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase	PFAM:PF01979	PANTHER:PTHR11647	PANTHER:PTHR11647:SF1
SUPFAM:SSF51338	SUPFAM:SSF51556	SignalP:SignalP-noTM	TIGRFAMs:TIGR02033	UniParc:UPI0004EED21C	SEG:seg

Description

BnaA10g20470D

Coordinates

chrLK031790:+:1446238..1449669

Molecular Weight (calculated)

58774.5 Da

IEP (calculated)

5.735

GRAVY (calculated)

-0.061

Length

541 amino acids

Sequence
(BLAST)

001: MALRPMEDAI FFFSIISLLL LFPSPSVSDS ATQFCSAERG PGGESCGVPS SSSTRILIKG GTVVNAHHQQ LADVYVEDGI IVAVQPNIKV GDEVTVLDAT
101: GKFVMPGGID PHTHLAMEFM GTETIDDFFS GQAAALAGGT TMHIDFVIPV NGNLVAGFES YENKSRNACM DYGFHMAITK WDEDVSKDME IMVKEKGINS
201: FKFFLAYKGS LMVTDDLLLE GLKRCKSLGA LAMVHAENGD AVFEGQKRMI ELGITGPEGH ALSRPPVLEG EATSRAIRLA RFVNTPLYVV HVMSVDAMDE
301: IAKARKAGQK VIGEPVVSGL ILDDHWLWDP DFKIASKYVM SPPIRSVGHG KALQEALSTG ILQLVGTDHC TFNSTQKALG LDDFRKIPNG VNGLEERMHL
401: TWDTMVGSGQ ISATDFVRIT STECAKIFNI YPRKGAILPG SDADIIILNP NSSYVISSKS HHSRSDTNVY EGRRGQGKVE VTIAGGRIVW ENDELKVVPG
501: SGKYVEMPPF SYLFDGIDKS DANYLSSLRA PVKRVRSEAT T

Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)

001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

Arabidopsis Description

PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.