Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- plastid 2
- vacuole 5
- plasma membrane 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008908.1-P | Field mustard | vacuole | 90.96 | 89.44 |
| CDX69698 | Canola | vacuole | 90.77 | 89.09 |
| VIT_06s0009g02790.t01 | Wine grape | endoplasmic reticulum, vacuole | 79.28 | 78.54 |
| KRH10574 | Soybean | endoplasmic reticulum | 76.08 | 77.1 |
| Solyc11g064920.1.1 | Tomato | vacuole | 76.84 | 76.4 |
| KRH14595 | Soybean | endoplasmic reticulum | 74.01 | 74.71 |
| KRH73532 | Soybean | endoplasmic reticulum | 73.63 | 74.33 |
| GSMUA_Achr7P21420_001 | Banana | extracellular, vacuole | 74.58 | 74.3 |
| Os01t0807900-01 | Rice | endoplasmic reticulum, vacuole | 73.63 | 72.54 |
| CDX97175 | Canola | vacuole | 91.34 | 71.75 |
| OQU87726 | Sorghum | vacuole | 72.32 | 71.64 |
| TraesCS3D01G327500.2 | Wheat | endoplasmic reticulum, extracellular | 72.13 | 71.46 |
| HORVU3Hr1G079000.23 | Barley | endoplasmic reticulum, extracellular | 72.32 | 71.38 |
| Zm00001d043152_P001 | Maize | extracellular | 72.13 | 71.19 |
| TraesCS3B01G365000.2 | Wheat | extracellular, golgi | 71.94 | 71.14 |
| TraesCS3A01G334000.2 | Wheat | endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 71.75 | 70.82 |
| KRH43883 | Soybean | endoplasmic reticulum | 65.54 | 67.44 |
| VIT_13s0047g00920.t01 | Wine grape | cytosol | 11.86 | 63.64 |
| Zm00001d012711_P001 | Maize | cytosol | 10.36 | 53.92 |
| AT4G04955.1 | Thale cress | extracellular, golgi, vacuole | 19.21 | 20.16 |
Protein Annotations
| Gene3D:2.30.40.10 | Gene3D:3.20.20.140 | MapMan:6.2.4.4 | EntrezGene:831093 | UniProt:A0A178UKD8 | ProteinID:AED91773.1 |
| EMBL:AF465755 | ArrayExpress:AT5G12200 | EnsemblPlantsGene:AT5G12200 | RefSeq:AT5G12200 | TAIR:AT5G12200 | RefSeq:AT5G12200-TAIR-G |
| EnsemblPlants:AT5G12200.1 | TAIR:AT5G12200.1 | InterPro:Amidohydro-rel | Unigene:At.8822 | ProteinID:BAB10038.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004157 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005794 | GO:GO:0006139 | GO:GO:0006212 | GO:GO:0007154 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009987 |
| GO:GO:0009991 | GO:GO:0012505 | GO:GO:0016787 | GO:GO:0016810 | GO:GO:0019483 | GO:GO:0043562 |
| GO:GO:0046872 | InterPro:Hydantoinase/dihydroPyrase | InterPro:IPR011059 | MEROPS:M38.973 | InterPro:Metal-dep_hydrolase_composite | InterPro:Metal_Hydrolase |
| RefSeq:NP_568258.2 | ProteinID:OAO93564.1 | PFAM:PF01979 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR11647 | PANTHER:PTHR11647:SF1 | Symbol:PYD2 |
| UniProt:Q9FMP3 | SUPFAM:SSF51338 | SUPFAM:SSF51556 | SignalP:SignalP-noTM | TIGRFAMs:TIGR02033 | UniParc:UPI0000003379 |
| SEG:seg | : | : | : | : | : |
Description
PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
Coordinates
chr5:-:3941528..3944866
Molecular Weight (calculated)
57994.6 Da
IEP (calculated)
5.740
GRAVY (calculated)
-0.063
Length
531 amino acids
Sequence
(BLAST)
(BLAST)
001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.