Factsheet for Solyc11g064920.1.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g02790.t01	Wine grape	endoplasmic reticulum, vacuole	79.59	79.29
KRH10574	Soybean	endoplasmic reticulum	76.4	77.86
AT5G12200.1	Thale cress	vacuole	76.4	76.84
CDX69698	Canola	vacuole	76.78	75.79
Bra008908.1-P	Field mustard	vacuole	76.4	75.56
KRH14595	Soybean	endoplasmic reticulum	73.22	74.33
KRH73532	Soybean	endoplasmic reticulum	72.66	73.76
GSMUA_Achr7P21420_001	Banana	extracellular, vacuole	72.1	72.23
TraesCS3D01G327500.2	Wheat	endoplasmic reticulum, extracellular	69.85	69.59
HORVU3Hr1G079000.23	Barley	endoplasmic reticulum, extracellular	69.85	69.33
TraesCS3A01G334000.2	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	69.85	69.33
Os01t0807900-01	Rice	endoplasmic reticulum, vacuole	69.66	69.02
Zm00001d043152_P001	Maize	extracellular	69.48	68.96
TraesCS3B01G365000.2	Wheat	extracellular, golgi	69.29	68.9
OQU87726	Sorghum	vacuole	68.91	68.66
KRH43883	Soybean	endoplasmic reticulum	66.1	68.41
VIT_13s0047g00920.t01	Wine grape	cytosol	11.98	64.65
CDX97175	Canola	vacuole	76.03	60.06
Zm00001d012711_P001	Maize	cytosol	10.11	52.94
Solyc02g078400.2.1	Tomato	vacuole	21.54	22.86

Protein Annotations

Gene3D:2.30.40.10	Gene3D:3.20.20.140	MapMan:6.2.4.4	InterPro:Amidohydro-rel	GO:GO:0003674	GO:GO:0003824
GO:GO:0004157	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0006139	GO:GO:0006212	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0012505	GO:GO:0016787
GO:GO:0016810	GO:GO:0043562	InterPro:Hydantoinase/dihydroPyrase	InterPro:IPR011059	UniProt:K4D9A5	MEROPS:M38.977
InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase	PFAM:PF01979	PANTHER:PTHR11647	PANTHER:PTHR11647:SF1	SUPFAM:SSF51338
SUPFAM:SSF51556	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc11g064920.1	EnsemblPlants:Solyc11g064920.1.1	TIGRFAMs:TIGR02033	UniParc:UPI00027697FC
SEG:seg	:	:	:	:	:

Description

Dihydropyrimidinase [Source:Projected from Arabidopsis thaliana (AT5G12200) UniProtKB/Swiss-Prot;Acc:Q9FMP3]

Coordinates

chr11:+:50232605..50241543

Molecular Weight (calculated)

58255.2 Da

IEP (calculated)

5.589

GRAVY (calculated)

0.044

Length

534 amino acids

Sequence
(BLAST)

001: MEFFFRVQLL IPLISVLLAL FPLSESNNIQ FCDATNIYGD SGCDFMSSVS SKILIKGGTV VNAHHKEVAD VYIEDGTIVA VQPNIKVSDD IKVIDATGKF
101: VMPGGIDPHT HLAMEFMGSE TIDDFFSGQA AALAGGTTMH IDFVIPVDGS LSAGYEAYVE KAKRSCMDYG FHMAITKWNE TVSEEMEIMV KEKGINSFKF
201: FLAYKGSFMV NDELLMEGLK KCKSLGALAM VHAENGDAVF EGQKRMIELG ITGPEGHALS RPPVLEGEAT ARAIRLASFV NTPLYVVHVM SIDAMEEIAR
301: ARKSGQRIVG EPVVSGLLLN DSVLWDPDFH FAARYVMSPP IRAAGHGTAL QAALAAGVLQ LVGTDHCTFN STQKALGIGD FRKIPNGVNG MEERMHLVWN
401: TMVASGQISV TDYVRITSTE CARIFNIYPR KGAILVGSDA DIIILNPNSS FKISSKSHHY RTDTNVYEGW TGMGKVETTI AGGRVVWEND ELKVIPGAGK
501: YIEMPPFSYL FDGIDKADAK YLSSLRAPVE RSTT

Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)

001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

Arabidopsis Description

PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.