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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_06s0009g02790.t01 Wine grape endoplasmic reticulum, vacuole 75.76 13.99
KRH10574 Soybean endoplasmic reticulum 69.7 13.17
KRH14595 Soybean endoplasmic reticulum 69.7 13.12
KRH73532 Soybean endoplasmic reticulum 69.7 13.12
GSMUA_Achr7P21420_001 Banana extracellular, vacuole 67.68 12.57
KRH43883 Soybean endoplasmic reticulum 63.64 12.21
Solyc11g064920.1.1 Tomato vacuole 64.65 11.98
TraesCS3D01G327500.2 Wheat endoplasmic reticulum, extracellular 64.65 11.94
HORVU3Hr1G079000.23 Barley endoplasmic reticulum, extracellular 64.65 11.9
TraesCS3A01G334000.2 Wheat endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 64.65 11.9
AT5G12200.1 Thale cress vacuole 63.64 11.86
OQU87726 Sorghum vacuole 63.64 11.75
TraesCS3B01G365000.2 Wheat extracellular, golgi 63.64 11.73
Zm00001d043152_P001 Maize extracellular 63.64 11.71
Os01t0807900-01 Rice endoplasmic reticulum, vacuole 63.64 11.69
Bra008908.1-P Field mustard vacuole 63.64 11.67
CDX69698 Canola vacuole 63.64 11.65
CDX97175 Canola vacuole 63.64 9.32
Zm00001d012711_P001 Maize cytosol 2.02 1.96
VIT_15s0024g01090.t01 Wine grape cytosol 0.0 0.0
Protein Annotations
ArrayExpress:VIT_13s0047g00920EMBL:FN595767EnsemblPlants:VIT_13s0047g00920.t01EnsemblPlantsGene:VIT_13s0047g00920Gene3D:3.20.20.140InterPro:Metal_Hydrolase
PANTHER:PTHR11647PANTHER:PTHR11647:SF1ProteinID:CCB52161ProteinID:CCB52161.1SUPFAM:SSF51556UniParc:UPI0002108DCA
UniProt:F6HIZ5MapMan:35.1::::
Description
No Description!
Coordinates
chr13:-:17581089..17581892
Molecular Weight (calculated)
10675.7 Da
IEP (calculated)
4.697
GRAVY (calculated)
-0.137
Length
99 amino acids
Sequence
(BLAST)
1: MTKFQEGATD LPLTGIEAVL SSEDLQDLDF INAAKYVMSP PIRASGHDKA LQAALSTGNL QLVGTDHCAF NSTQKAFGIN DFRTIPNGVN GIEERMHLV
Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)
001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T
Arabidopsis Description
PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.