Factsheet for VIT_06s0009g02790.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0024g01090.t01	Wine grape	cytosol	8.58	83.64
KRH10574	Soybean	endoplasmic reticulum	81.72	83.59
KRH14595	Soybean	endoplasmic reticulum	79.29	80.8
KRH73532	Soybean	endoplasmic reticulum	78.54	80.04
Solyc11g064920.1.1	Tomato	vacuole	79.29	79.59
AT5G12200.1	Thale cress	vacuole	78.54	79.28
Bra008908.1-P	Field mustard	vacuole	78.54	77.96
CDX69698	Canola	vacuole	78.54	77.82
VIT_13s0047g00920.t01	Wine grape	cytosol	13.99	75.76
GSMUA_Achr7P21420_001	Banana	extracellular, vacuole	74.25	74.67
KRH43883	Soybean	endoplasmic reticulum	70.71	73.45
TraesCS3D01G327500.2	Wheat	endoplasmic reticulum, extracellular	72.57	72.57
Os01t0807900-01	Rice	endoplasmic reticulum, vacuole	72.57	72.17
HORVU3Hr1G079000.23	Barley	endoplasmic reticulum, extracellular	72.39	72.12
TraesCS3A01G334000.2	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	72.39	72.12
TraesCS3B01G365000.2	Wheat	extracellular, golgi	72.2	72.07
OQU87726	Sorghum	vacuole	71.46	71.46
Zm00001d043152_P001	Maize	extracellular	71.46	71.19
CDX97175	Canola	vacuole	78.36	62.13
Zm00001d012711_P001	Maize	cytosol	10.63	55.88

Protein Annotations

EntrezGene:100249986	wikigene:100249986	Gene3D:2.30.40.10	Gene3D:3.20.20.140	MapMan:6.2.4.4	InterPro:Amidohydro-rel
ProteinID:CBI24267	ProteinID:CBI24267.3	UniProt:D7T187	EMBL:FN595504	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0016787	GO:GO:0016810
InterPro:Hydantoinase/dihydroPyrase	InterPro:IPR011059	EntrezGene:LOC100249986	wikigene:LOC100249986	InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase
PFAM:PF01979	PANTHER:PTHR11647	PANTHER:PTHR11647:SF1	SUPFAM:SSF51338	SUPFAM:SSF51556	SignalP:SignalP-noTM
TIGRFAMs:TIGR02033	UniParc:UPI0001BE2852	ArrayExpress:VIT_06s0009g02790	EnsemblPlantsGene:VIT_06s0009g02790	EnsemblPlants:VIT_06s0009g02790.t01	unigene:Vvi.24927
RefSeq:XP_002273526	RefSeq:XP_002273526.2	RefSeq:XP_010651530.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:+:15634711..15656052

Molecular Weight (calculated)

58068.1 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.026

Length

536 amino acids

Sequence
(BLAST)

001: MDSLLAYQLL RILSLTLLLS SFSRISKSSE FCDAGTGFGD SGCVVSSKSA SKLLIKGGTV VNAHHQEIAD VYVEDGIIVA VKPNIKVGDD VTVLDATGKF
101: VMPGGIDPHT HLAMEFMGTE TIDDFFSGQA AALAGGTTMH IDFVIPVKGS LSKGLEAYKD KAKKSCMDYG FHMAITKWDE NVSREMEIMV KEKGINSFKF
201: FLAYKGALMI NDELLLEGLK KCKSLGALAM VHAENGDAVF EGQKRMIELG ITGPEGHALS RPPVLEGEAT ARAIRLASFV NTPLYVVHVM SIDAMEEIAK
301: ARKSGQRVIG EPVVSGLVLD DSGLWDPDFI NAAKYVMSPP IRALGHDKAL QAALSTGNLQ LVGTDHCAFN STQKAFGIDD FRKIPNGVNG IEERMHLVWD
401: TMVESGQISV TDYVRITSTE CARIFNMYPR KGAILAGSDA DIIILNPNSS FQITARSHHS RLDTNVFEGR KGKGKVEVTI AGGKIVWEND ELKAVPGSGK
501: YIEMQPFSYL FNGIDKVDAK YLSSLQAPVQ RSKAAS

Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)

001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

Arabidopsis Description

PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.