Factsheet for Zm00001d043152_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87726	Sorghum	vacuole	93.12	93.47
TraesCS3D01G327500.2	Wheat	endoplasmic reticulum, extracellular	88.29	88.62
TraesCS3B01G365000.2	Wheat	extracellular, golgi	87.55	87.71
TraesCS3A01G334000.2	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	87.36	87.36
Os01t0807900-01	Rice	endoplasmic reticulum, vacuole	86.25	86.09
HORVU3Hr1G079000.23	Barley	endoplasmic reticulum, extracellular	85.5	85.5
GSMUA_Achr7P21420_001	Banana	extracellular, vacuole	74.16	74.86
AT5G12200.1	Thale cress	vacuole	71.19	72.13
Bra008908.1-P	Field mustard	vacuole	72.12	71.85
VIT_06s0009g02790.t01	Wine grape	endoplasmic reticulum, vacuole	71.19	71.46
CDX69698	Canola	vacuole	71.38	70.98
KRH10574	Soybean	endoplasmic reticulum	68.4	70.23
Zm00001d012711_P001	Maize	cytosol	13.2	69.61
Solyc11g064920.1.1	Tomato	vacuole	68.96	69.48
KRH14595	Soybean	endoplasmic reticulum	67.66	69.2
KRH73532	Soybean	endoplasmic reticulum	67.47	69.01
VIT_13s0047g00920.t01	Wine grape	cytosol	11.71	63.64
KRH43883	Soybean	endoplasmic reticulum	59.29	61.82
CDX97175	Canola	vacuole	71.75	57.1
Zm00001d045132_P001	Maize	cytosol	2.04	25.0
Zm00001d041637_P001	Maize	cytosol	3.16	22.97
Zm00001d026635_P002	Maize	endoplasmic reticulum, extracellular, vacuole	21.75	22.24

Protein Annotations

EntrezGene:100272767	Gene3D:2.30.40.10	Gene3D:3.20.20.140	MapMan:6.2.4.4	InterPro:Amidohydro-rel	UniProt:B4FQJ2
EMBL:BT039380	EMBL:BT065494	GO:GO:0003674	GO:GO:0003824	GO:GO:0004157	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005794	GO:GO:0006139
GO:GO:0006212	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605
GO:GO:0009987	GO:GO:0009991	GO:GO:0012505	GO:GO:0016787	GO:GO:0016810	GO:GO:0043562
InterPro:Hydantoinase/dihydroPyrase	InterPro:IPR011059	InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase	ProteinID:ONM37122.1	ProteinID:ONM37128.1
ProteinID:ONM37131.1	PFAM:PF01979	PANTHER:PTHR11647	PANTHER:PTHR11647:SF1	SUPFAM:SSF51338	SUPFAM:SSF51556
SignalP:SignalP-noTM	TIGRFAMs:TIGR02033	TMHMM:TMhelix	UniParc:UPI00017B8165	EnsemblPlantsGene:Zm00001d043152	EnsemblPlants:Zm00001d043152_P001
EnsemblPlants:Zm00001d043152_T001	SEG:seg	:	:	:	:

Description

Dihydropyrimidinase

Coordinates

chr3:-:190249713..190264424

Molecular Weight (calculated)

57733.6 Da

IEP (calculated)

6.034

GRAVY (calculated)

0.025

Length

538 amino acids

Sequence
(BLAST)

001: MATQALAPSL RLLLLLPLLA AAAAAAALSH PAHEFCAVGG DASGCGGGGD GTRILIKGGT VVNAHLAEEA DVYIEDGVVV AVRPDIPVDV DNVRVIDATG
101: KYVMPGGIDP HTHLEMEFMG TVTIDDFFSG HAAALAGGTT MHIDFVIPVD GNLTAGLESY KHKAAKAAMD YGFHMAITKW NDEVAREMEV MVKEHGINSF
201: KFFMAYKGSL MVTDDLLLQG LRKCKSLGAL AMVHAENGDA VAEGQQRMID LGITGPEGHA LSRPPILEGE ATARAIRLAK FINTPLYVVH VMSIDAMDEI
301: AKAKREGQRV IGEPVVSGLV LDDSWLWDPD FTIASKYVMS PPIREAGHGK ALQAALSSGI LQLVGTDHCT FNSTQKAFGS DDFRKIPNGV NGLEERMHIL
401: WDSMVETGKI SVTDYVRVTS TECAKTFNIF PRKGAILEGS DADIIILNPE RSFVMGALTH HSRSNTNVYE GRKGKGMVEI TISRGRVVWE DGVLNIAPGS
501: GRYVMMPPFG YVFDGIEKSD ATYRASLRAP VQRGKAAA

Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)

001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

Arabidopsis Description

PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.