CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 7
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69698	Canola	vacuole	74.7	93.35
AT5G12200.1	Thale cress	vacuole	71.75	91.34
VIT_06s0009g02790.t01	Wine grape	endoplasmic reticulum, vacuole	62.13	78.36
KRH10574	Soybean	endoplasmic reticulum	59.62	76.91
Solyc11g064920.1.1	Tomato	vacuole	60.06	76.03
KRH14595	Soybean	endoplasmic reticulum	58.43	75.1
KRH73532	Soybean	endoplasmic reticulum	57.99	74.52
GSMUA_Achr7P21420_001	Banana	extracellular, vacuole	58.14	73.73
Os01t0807900-01	Rice	endoplasmic reticulum, vacuole	57.84	72.54
TraesCS3D01G327500.2	Wheat	endoplasmic reticulum, extracellular	57.1	72.01
OQU87726	Sorghum	vacuole	57.1	72.01
TraesCS3B01G365000.2	Wheat	extracellular, golgi	57.1	71.88
Zm00001d043152_P001	Maize	extracellular	57.1	71.75
TraesCS3A01G334000.2	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	56.66	71.19
HORVU3Hr1G079000.23	Barley	endoplasmic reticulum, extracellular	56.51	71.0
KRH43883	Soybean	endoplasmic reticulum	51.18	67.05
VIT_13s0047g00920.t01	Wine grape	cytosol	9.32	63.64
Zm00001d012711_P001	Maize	cytosol	8.58	56.86
CDY68077	Canola	mitochondrion	4.44	28.3
CDY16634	Canola	endoplasmic reticulum, vacuole	15.53	20.87
CDY44735	Canola	extracellular, vacuole	15.53	20.83
CDX69699	Canola	cytosol	3.7	20.16
CDX78469	Canola	cytosol	3.55	19.35
CDX70451	Canola	cytosol	3.55	19.35

Protein Annotations

Gene3D:2.30.40.10	Gene3D:3.20.20.140	MapMan:6.2.4.4	GO:A0A078E549	InterPro:Amidohydro-rel	EnsemblPlants:CDX97175
ProteinID:CDX97175	ProteinID:CDX97175.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0016787	GO:GO:0016810	EnsemblPlantsGene:GSBRNA2T00104171001	InterPro:Hydantoinase/dihydroPyrase
InterPro:IPR011059	InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase	PFAM:PF01979	PANTHER:PTHR11647	PANTHER:PTHR11647:SF1
SUPFAM:SSF51338	SUPFAM:SSF51556	SignalP:SignalP-noTM	TIGRFAMs:TIGR02033	UniParc:UPI0004EEC147	SEG:seg

Description

BnaC09g44500D

Coordinates

chrLK031897:-:1032842..1037209

Molecular Weight (calculated)

74965.6 Da

IEP (calculated)

7.226

GRAVY (calculated)

-0.379

Length

676 amino acids

Sequence
(BLAST)

001: MALRPIYDAI FFFFISLLLL FPSPSVSDSA TQFCSAERGP GVESCRVPSS SSSSTRILIK GGTVVNAHHQ QLADVYVEDG IIVAVQPNIK VGDEVTVLDA
101: TGKFVMPGGI DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE SYENKSRNAC MDYGFHMAIT KWDDGVSKDM EIMVKEKGIN
201: SFKFFLAYKG SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATSRAIRL ARFVNTPLYV VHVMSVDAMD
301: EIAKARKAGQ KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRKIPN GVNGLEERMH
401: LTWDTMVGSG QISATDFVRI TSTECAKIFN IYPRKGAILP GSDADIIILN PNSSYEITSK SHHSRSDTNV YEGRRGQGKV EVTIAGGRIV WENDELKVVP
501: GSGKYVEMPP FSYLFDGIEK SDANYLSSLR APVKRVRTDT KIKRKIMNKS LLEIYFPTEE DLSEKQEIES YDDSQSPQAK HEAPTRSKPR ALRPQPPLQH
601: NERGDVRHLR QVRRDPPDSD RMQQGHERHG LRRLRGHLRR ETSRGPSLRV QRREPKKSEE EVAKLQEKYG VSTKDK

Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)

001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

Arabidopsis Description

PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.