CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
mitochondrion 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	mitochondrion
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44735	Canola	extracellular, vacuole	50.94	10.71
CDY16634	Canola	endoplasmic reticulum, vacuole	50.0	10.54
CDX70451	Canola	cytosol	6.6	5.65
CDX78469	Canola	cytosol	6.6	5.65
CDX69698	Canola	vacuole	28.3	5.55
CDX69699	Canola	cytosol	5.66	4.84
CDX97175	Canola	vacuole	28.3	4.44
VIT_15s0024g01090.t01	Wine grape	cytosol	0.94	1.82

Protein Annotations

EnsemblPlants:CDY68077	EnsemblPlantsGene:GSBRNA2T00069206001	Gene3D:3.20.20.140	InterPro:Metal_Hydrolase	PANTHER:PTHR43668	PANTHER:PTHR43668:SF2
ProteinID:CDY68077	ProteinID:CDY68077.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF51556	UniParc:UPI0004EED84E
UniProt:A0A078JRL5	MapMan:35.2	:	:	:	:

Description

BnaUnng02690DBnaUnng02690D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRL5]

Coordinates

chrLK036825:+:2701..3636

Molecular Weight (calculated)

11643.0 Da

IEP (calculated)

9.212

GRAVY (calculated)

-0.309

Length

106 amino acids

Sequence
(BLAST)

001: MTRIRSRHLL FFFLFSRHAH LDDPGSSEWE GGAKAAAAGG ITTLIDMPLN SDPSTVSPET LKLKSGEPRE VLSEKGITGT HSLEDRLKTL IDSKKVMLSM
101: KGWFTG

Best Arabidopsis Sequence Match ( AT4G04955.1 )
(BLAST)

001: MERTLLQWRL LPLLALIVAL FSFFFASPRS LQGNNKCSLL PHDHYWISSK RIVTPNGLIS GSVEVKGGII VSVVKEVDWH KSQRSRVKVI DYGEAVLMPG
101: LIDVHVHLDD PGRSEWEGFP SGTKAAAAGG ITTLVDMPLN SFPSTVSPET LKLKIEAAKN RIHVDVGFWG GLVPDNALNS SALESLLDAG VLGLKSFMCP
201: SGINDFPMTN ITHIKEGLSV LAKYKRPLLV HAEIERDLEI EDGSENDPRS YLTYLKTRPT SWEEGAIRNL LSVTENTRIG GSAEGAHLHI VHLSDASSSL
301: DLIKEAKGKG DSVTVETCPH YLAFSAEEIP EGDTRFKCSP PIRDAANREK LWEALMEGDI DMLSSDHSPT KPELKLMSDG NFLKAWGGIS SLQFVLPITW
401: SYGKKYGVTL EQVTSWWSDR PSKLAGLHSK GAVTVGKHAD LVVWEPEAEF DVDEDHPIHF KHPSISAYLG RRLSGKVVST FVRGNLVFGE GKHASDACGS
501: LQLATT

Arabidopsis Description

ALNAllantoinase [Source:UniProtKB/Swiss-Prot;Acc:Q94AP0]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.