Factsheet for GSMUA_Achr7P21420_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
cytosol 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10574	Soybean	endoplasmic reticulum	75.42	76.72
OQU87726	Sorghum	vacuole	76.36	75.93
Os01t0807900-01	Rice	endoplasmic reticulum, vacuole	76.55	75.7
TraesCS3D01G327500.2	Wheat	endoplasmic reticulum, extracellular	75.98	75.56
TraesCS3B01G365000.2	Wheat	extracellular, golgi	75.98	75.42
TraesCS3A01G334000.2	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	75.8	75.09
HORVU3Hr1G079000.23	Barley	endoplasmic reticulum, extracellular	75.8	75.09
KRH14595	Soybean	endoplasmic reticulum	73.92	74.9
AT5G12200.1	Thale cress	vacuole	74.3	74.58
KRH73532	Soybean	endoplasmic reticulum	73.36	74.33
VIT_06s0009g02790.t01	Wine grape	endoplasmic reticulum, vacuole	74.67	74.25
Zm00001d043152_P001	Maize	extracellular	74.86	74.16
CDX69698	Canola	vacuole	74.11	73.01
Bra008908.1-P	Field mustard	vacuole	73.73	72.78
Solyc11g064920.1.1	Tomato	vacuole	72.23	72.1
KRH43883	Soybean	endoplasmic reticulum	65.67	67.83
VIT_13s0047g00920.t01	Wine grape	cytosol	12.57	67.68
Zm00001d012711_P001	Maize	cytosol	11.44	59.8
CDX97175	Canola	vacuole	73.73	58.14
GSMUA_AchrUn_...	Banana	extracellular	17.26	19.78
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	5.44	18.83

Protein Annotations

Gene3D:2.30.40.10	Gene3D:3.20.20.140	MapMan:6.2.4.4	InterPro:Amidohydro-rel	GO:GO:0003674	GO:GO:0003824
GO:GO:0004157	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005794	GO:GO:0006139	GO:GO:0006212	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009605	GO:GO:0009987	GO:GO:0009991	GO:GO:0012505	GO:GO:0016787
GO:GO:0016810	GO:GO:0043562	EnsemblPlantsGene:GSMUA_Achr7G21420_001	EnsemblPlants:GSMUA_Achr7P21420_001	EnsemblPlants:GSMUA_Achr7T21420_001	InterPro:Hydantoinase/dihydroPyrase
InterPro:IPR011059	UniProt:M0TJH8	InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase	PFAM:PF01979	PFscan:PS51257
PANTHER:PTHR11647	PANTHER:PTHR11647:SF1	SUPFAM:SSF51338	SUPFAM:SSF51556	SignalP:SignalP-noTM	TIGRFAMs:TIGR02033
UniParc:UPI000294A686	SEG:seg	:	:	:	:

Description

Dihydropyrimidinase [Source:GMGC_GENE;Acc:GSMUA_Achr7G21420_001]

Coordinates

chr7:+:24199047..24204260

Molecular Weight (calculated)

57902.8 Da

IEP (calculated)

6.834

GRAVY (calculated)

-0.057

Length

533 amino acids

Sequence
(BLAST)

001: MAIRARRPLR SDAFLLLVLF LVSISCSTSE PQGFCAVGYE SDCGLSSEKI LIKGGTVVNA HRKEVADVYI EDGIVVSVRP NIKVGDHVKI IDATGKYVMP
101: GGIDPHTHLE MEFMGTVTID DFFTGQAAAL AGGTTMHIDF VIPVNGNLSA GFESYMNKAK KAVMDYGFHM AITKWDEGVS KDMELMVNEH GINSFKFFMA
201: YKGSLMIRDE LLLQGLQKCK SLGAIAMVHA ENGDAVAEGQ KRMIDLGITG PEGHALSRPP VLEGEATARA IRLANFVNTP LYVVHVMSID AMEEIAKARK
301: AGQRVIGEPV ASGLILDDSW LWHPDYTTAA KYVMSPPIRT SGHDKALQAA LSTGVLQLVG TDHCAFNSTQ KALGSEDFRK IPNGVNGIEE RMHLIWDKMV
401: ESGQMTVTDY VRVTSTECAK VFNIYPRKGA ILEGSDADII ILNPNASFKI AAASHHSRSD TNVYEGTKGK GKVEVTISQG RVVYEDGKLK VTPGSGRYIR
501: MPPFGYLFDG IEKADAAYFA SLNAPIQRTK SAA

Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)

001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

Arabidopsis Description

PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.