Factsheet for Zm00001d012711_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU87726	Sorghum	vacuole	70.59	13.43
Zm00001d043152_P001	Maize	extracellular	69.61	13.2
TraesCS3D01G327500.2	Wheat	endoplasmic reticulum, extracellular	67.65	12.87
TraesCS3B01G365000.2	Wheat	extracellular, golgi	67.65	12.85
HORVU3Hr1G079000.23	Barley	endoplasmic reticulum, extracellular	66.67	12.64
TraesCS3A01G334000.2	Wheat	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	66.67	12.64
Os01t0807900-01	Rice	endoplasmic reticulum, vacuole	63.73	12.06
GSMUA_Achr7P21420_001	Banana	extracellular, vacuole	59.8	11.44
VIT_06s0009g02790.t01	Wine grape	endoplasmic reticulum, vacuole	55.88	10.63
CDX69698	Canola	vacuole	55.88	10.54
KRH10574	Soybean	endoplasmic reticulum	53.92	10.5
Bra008908.1-P	Field mustard	vacuole	54.9	10.37
AT5G12200.1	Thale cress	vacuole	53.92	10.36
KRH43883	Soybean	endoplasmic reticulum	51.96	10.27
Solyc11g064920.1.1	Tomato	vacuole	52.94	10.11
KRH73532	Soybean	endoplasmic reticulum	50.98	9.89
KRH14595	Soybean	endoplasmic reticulum	50.98	9.89
CDX97175	Canola	vacuole	56.86	8.58
Zm00001d026635_P002	Maize	endoplasmic reticulum, extracellular, vacuole	18.63	3.61
VIT_13s0047g00920.t01	Wine grape	cytosol	1.96	2.02
Zm00001d041637_P001	Maize	cytosol	0.0	0.0
Zm00001d045132_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d012711_P001	EnsemblPlants:Zm00001d012711_T001	EnsemblPlantsGene:Zm00001d012711	Gene3D:3.20.20.140	InterPro:Metal_Hydrolase	PANTHER:PTHR11647
PANTHER:PTHR11647:SF1	ProteinID:AQL00383.1	SUPFAM:SSF51556	UniParc:UPI00084294B0	UniProt:A0A1D6GBC0	MapMan:35.1

Description

Dihydropyrimidinase

Coordinates

chr8:+:179078879..179081493

Molecular Weight (calculated)

11538.9 Da

IEP (calculated)

4.644

GRAVY (calculated)

-0.018

Length

102 amino acids

Sequence
(BLAST)

001: MPEMEFMGTV TIDDFFDFFG GHAMALAGGT TMHIDFIIHV NSNLTAWSES DKHKAAKASM DYGFHMAITK WDDEVAREME VMVKEHGQRI IGEPVVIPMQ
101: FL

Best Arabidopsis Sequence Match ( AT5G12200.1 )
(BLAST)

001: MALDAFFFIV SLFLLFPSPS ASESTTQFCS AGRENGVGSC GVSSTRILIK GGTVVNAHHQ ELADVYVENG IIVAVQPNIK VGDEVTVLDA TGKFVMPGGI
101: DPHTHLAMEF MGTETIDDFF SGQAAALAGG TTMHIDFVIP VNGNLVAGFE AYENKSRESC MDYGFHMAIT KWDEGVSRDM EMLVKEKGIN SFKFFLAYKG
201: SLMVTDDLLL EGLKRCKSLG ALAMVHAENG DAVFEGQKRM IELGITGPEG HALSRPPVLE GEATARAIRL ARFINTPLYV VHVMSVDAMD EIAKARKSGQ
301: KVIGEPVVSG LILDDHWLWD PDFTIASKYV MSPPIRPVGH GKALQDALST GILQLVGTDH CTFNSTQKAL GLDDFRRIPN GVNGLEERMH LIWDTMVESG
401: QLSATDYVRI TSTECARIFN IYPRKGAILA GSDADIIILN PNSSYEISSK SHHSRSDTNV YEGRRGKGKV EVTIAGGRIV WENEELKVVP RSGKYIEMPP
501: FSYLFDGIEK SDANYLSSLR APVKRVRTEA T

Arabidopsis Description

PYD2Dihydropyrimidinase [Source:UniProtKB/Swiss-Prot;Acc:Q9FMP3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.