CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10854	Soybean	nucleus	97.07	95.21
KRH10853	Soybean	endoplasmic reticulum	85.55	85.38
KRH21462	Soybean	endoplasmic reticulum	83.98	83.82
Zm00001d045132_P001	Maize	cytosol	6.25	72.73
Zm00001d041637_P001	Maize	cytosol	10.16	70.27
Bra029537.1-P	Field mustard	extracellular, vacuole	65.43	66.47
AT4G04955.1	Thale cress	extracellular, golgi, vacuole	65.43	66.21
CDY44735	Canola	extracellular, vacuole	65.04	66.07
CDY16634	Canola	endoplasmic reticulum, vacuole	64.84	66.0
Solyc02g078400.2.1	Tomato	vacuole	63.87	65.01
PGSC0003DMT400057649	Potato	vacuole	63.28	64.41
EES11665	Sorghum	extracellular, vacuole	60.16	60.87
TraesCS2A01G587900.1	Wheat	endoplasmic reticulum	59.77	60.59
TraesCS2B01G595300.1	Wheat	endoplasmic reticulum, extracellular	59.57	60.4
TraesCS2D01G565300.1	Wheat	endoplasmic reticulum, extracellular	59.38	60.2
Zm00001d026635_P002	Maize	endoplasmic reticulum, extracellular, vacuole	60.35	58.75
GSMUA_AchrUn_...	Banana	extracellular	50.98	56.13
Os04t0680400-01	Rice	endoplasmic reticulum, extracellular	33.4	54.11
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	12.5	41.56
KRH14595	Soybean	endoplasmic reticulum	20.9	20.34
KRH73532	Soybean	endoplasmic reticulum	20.51	19.96
KRH10574	Soybean	endoplasmic reticulum	20.31	19.85
KRH43883	Soybean	endoplasmic reticulum	18.55	18.41

Protein Annotations

KEGG:00230+3.5.2.5	EntrezGene:100809727	Gene3D:3.20.20.140	MapMan:6.1.4.8	EMBL:ACUP02008356	InterPro:Allantoinase
InterPro:Amidohydro-rel	EnsemblPlantsGene:GLYMA_13G240500	GO:GO:0000256	GO:GO:0003674	GO:GO:0003824	GO:GO:0004038
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006139
GO:GO:0006145	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016810	GO:GO:0050897	UniProt:I1M259
InterPro:IPR011059	EnsemblPlants:KRH21460	ProteinID:KRH21460	ProteinID:KRH21460.1	ProteinID:KRH21461.1	InterPro:Metal-dep_hydrolase_composite
InterPro:Metal_Hydrolase	PFAM:PF01979	PANTHER:PTHR43668	PANTHER:PTHR43668:SF2	MetaCyc:PWY-5697	MetaCyc:PWY-5698
SUPFAM:SSF51338	SUPFAM:SSF51556	TIGRFAMs:TIGR03178	TMHMM:TMhelix	UniParc:UPI000233AF5F	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:35036990..35044109

Molecular Weight (calculated)

56628.5 Da

IEP (calculated)

8.829

GRAVY (calculated)

-0.160

Length

512 amino acids

Sequence
(BLAST)

001: MEQFVWRVLP LLTILMSLVV FFYLQDSYRA HLHPLVKLPR SKCSLLPHRH FWITSKRIVT PQGIISGSVE INEGKIISVI KGYSKQGKSK QEKIIDYGGA
101: VVMPGLIDVH VHLDEPGRTA WEGFDTGTRA AAAGGVTTVV DMPLNNHPTT VSRETLKLKL EAAENKIYVD VGFWGGLIPE NAHNTSILEG LLSAGVLGLK
201: SFMCPSGISD FPLTTIHHIK EGLSVLAKYR RPLLVHSEIQ QHSKKHLELN DKGGPRAYLT YLHTRPPSWE EAAIKELVGV TKDTRKGGPL EGAHVHVVHL
301: SDSSASLDLI KEAKRRGDSI SVETCPHYLA FSSEEIPNGD TRFKCSPPIR DAYNREKLWE AVLEGHIDLL SSDHSPTVPQ LKLLEEGDFL KAWGGVTSLQ
401: FDLPVTWSYG KKHGLTLEQL SLLWSKKPAT FAGLESKGAI AVGNHADIVV WKPEVEFDLN EDYPVFLKHP SLSAYMGRRL SGKVLETFVR GNLVFKKGKH
501: APSACGVPIL AK

Best Arabidopsis Sequence Match ( AT4G04955.1 )
(BLAST)

001: MERTLLQWRL LPLLALIVAL FSFFFASPRS LQGNNKCSLL PHDHYWISSK RIVTPNGLIS GSVEVKGGII VSVVKEVDWH KSQRSRVKVI DYGEAVLMPG
101: LIDVHVHLDD PGRSEWEGFP SGTKAAAAGG ITTLVDMPLN SFPSTVSPET LKLKIEAAKN RIHVDVGFWG GLVPDNALNS SALESLLDAG VLGLKSFMCP
201: SGINDFPMTN ITHIKEGLSV LAKYKRPLLV HAEIERDLEI EDGSENDPRS YLTYLKTRPT SWEEGAIRNL LSVTENTRIG GSAEGAHLHI VHLSDASSSL
301: DLIKEAKGKG DSVTVETCPH YLAFSAEEIP EGDTRFKCSP PIRDAANREK LWEALMEGDI DMLSSDHSPT KPELKLMSDG NFLKAWGGIS SLQFVLPITW
401: SYGKKYGVTL EQVTSWWSDR PSKLAGLHSK GAVTVGKHAD LVVWEPEAEF DVDEDHPIHF KHPSISAYLG RRLSGKVVST FVRGNLVFGE GKHASDACGS
501: LQLATT

Arabidopsis Description

ALNAllantoinase [Source:UniProtKB/Swiss-Prot;Acc:Q94AP0]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.