CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	endoplasmic reticulum

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH10853	Soybean	endoplasmic reticulum	94.15	94.15
KRH21460	Soybean	nucleus	83.82	83.98
KRH10854	Soybean	nucleus	84.02	82.57
Zm00001d041637_P001	Maize	cytosol	10.33	71.62
Zm00001d045132_P001	Maize	cytosol	5.65	65.91
Bra029537.1-P	Field mustard	extracellular, vacuole	64.52	65.67
CDY44735	Canola	extracellular, vacuole	64.52	65.67
AT4G04955.1	Thale cress	extracellular, golgi, vacuole	64.33	65.22
CDY16634	Canola	endoplasmic reticulum, vacuole	63.94	65.21
Solyc02g078400.2.1	Tomato	vacuole	62.96	64.21
PGSC0003DMT400057649	Potato	vacuole	62.77	64.02
TraesCS2A01G587900.1	Wheat	endoplasmic reticulum	61.01	61.98
TraesCS2B01G595300.1	Wheat	endoplasmic reticulum, extracellular	60.82	61.78
TraesCS2D01G565300.1	Wheat	endoplasmic reticulum, extracellular	60.43	61.39
EES11665	Sorghum	extracellular, vacuole	59.65	60.47
Zm00001d026635_P002	Maize	endoplasmic reticulum, extracellular, vacuole	59.84	58.37
Os04t0680400-01	Rice	endoplasmic reticulum, extracellular	34.89	56.65
GSMUA_AchrUn_...	Banana	extracellular	50.68	55.91
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	12.09	40.26
KRH73532	Soybean	endoplasmic reticulum	20.27	19.77
KRH14595	Soybean	endoplasmic reticulum	20.27	19.77
KRH10574	Soybean	endoplasmic reticulum	19.69	19.27
KRH43883	Soybean	endoplasmic reticulum	18.71	18.6

Protein Annotations

KEGG:00230+3.5.2.5	KEGG:00240+3.5.2.3	EntrezGene:100810258	Gene3D:3.20.20.140	MapMan:6.1.4.8	EMBL:ACUP02008356
InterPro:Allantoinase	InterPro:Amidohydro-rel	InterPro:Dihydroorotase_CS	EnsemblPlantsGene:GLYMA_13G240600	GO:GO:0000256	GO:GO:0003674
GO:GO:0003824	GO:GO:0004038	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006139	GO:GO:0006145	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016810
GO:GO:0016812	GO:GO:0050897	UniProt:I1M261	InterPro:IPR011059	EnsemblPlants:KRH21462	ProteinID:KRH21462
ProteinID:KRH21462.1	InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase	PFAM:PF01979	ScanProsite:PS00482	PANTHER:PTHR43668
PANTHER:PTHR43668:SF2	MetaCyc:PWY-5686	MetaCyc:PWY-5697	MetaCyc:PWY-5698	MetaCyc:PWY-7790	MetaCyc:PWY-7791
SUPFAM:SSF51338	SUPFAM:SSF51556	TIGRFAMs:TIGR03178	TMHMM:TMhelix	UniParc:UPI000233AF60	SEG:seg

Description

hypothetical protein

Coordinates

chr13:-:35047639..35053987

Molecular Weight (calculated)

56732.1 Da

IEP (calculated)

5.683

GRAVY (calculated)

-0.110

Length

513 amino acids

Sequence
(BLAST)

001: MDQFLWRVLP LLTILVSFGV FFYLQDSYTA QLFPLIKLPR DKCSLLPHRH FWISSKRIVT PQGIISGSVE INDGKIISVV EGHAIQGKPK QEEVIDYGDA
101: VIMPGLIDVH VHLNEPGRTE WEGFDTGTRA AAAGGVTTVV DMPLNCYPTT VSKEKLKLKL DAAEDKIYVD VGFWGGLIPE NALNTSILDG LLSAGVLGVK
201: SFMCPSGIDD FPMATIDHIK AGLSVLAKYR RPIVVHAEIQ QDFENHLELN EDNLDPRAYL TYLNTRPPSW EEAAIKQLVS VTKDTRKGGP LEGAHVHIVH
301: LSDSSASLDL IKEAKSHGDS ISVETCPHYL AFTSEEIPNG DTRFKCSPPI RDAYNKDKLW EAVLEGHIDL LSTDHSPTVP ELKLMEEGDF LKAWGGISSL
401: QFNLPVTWSY GKKYGLTLEQ LSLLWSKKPA TLAGLESKGT IAVGNHADIV VWQPELEFDL DDDYPVFIKH SELSAYMGRR LSGKVLETFV RGNLVFKDGK
501: HAPAPCGVQI LAK

Best Arabidopsis Sequence Match ( AT4G04955.1 )
(BLAST)

001: MERTLLQWRL LPLLALIVAL FSFFFASPRS LQGNNKCSLL PHDHYWISSK RIVTPNGLIS GSVEVKGGII VSVVKEVDWH KSQRSRVKVI DYGEAVLMPG
101: LIDVHVHLDD PGRSEWEGFP SGTKAAAAGG ITTLVDMPLN SFPSTVSPET LKLKIEAAKN RIHVDVGFWG GLVPDNALNS SALESLLDAG VLGLKSFMCP
201: SGINDFPMTN ITHIKEGLSV LAKYKRPLLV HAEIERDLEI EDGSENDPRS YLTYLKTRPT SWEEGAIRNL LSVTENTRIG GSAEGAHLHI VHLSDASSSL
301: DLIKEAKGKG DSVTVETCPH YLAFSAEEIP EGDTRFKCSP PIRDAANREK LWEALMEGDI DMLSSDHSPT KPELKLMSDG NFLKAWGGIS SLQFVLPITW
401: SYGKKYGVTL EQVTSWWSDR PSKLAGLHSK GAVTVGKHAD LVVWEPEAEF DVDEDHPIHF KHPSISAYLG RRLSGKVVST FVRGNLVFGE GKHASDACGS
501: LQLATT

Arabidopsis Description

ALNAllantoinase [Source:UniProtKB/Swiss-Prot;Acc:Q94AP0]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.