CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21460	Soybean	nucleus	95.21	97.07
KRH10853	Soybean	endoplasmic reticulum	84.48	85.96
KRH21462	Soybean	endoplasmic reticulum	82.57	84.02
Zm00001d045132_P001	Maize	cytosol	6.13	72.73
Zm00001d041637_P001	Maize	cytosol	10.15	71.62
Bra029537.1-P	Field mustard	extracellular, vacuole	64.18	66.47
AT4G04955.1	Thale cress	extracellular, golgi, vacuole	63.79	65.81
CDY44735	Canola	extracellular, vacuole	63.41	65.67
CDY16634	Canola	endoplasmic reticulum, vacuole	63.03	65.41
Solyc02g078400.2.1	Tomato	vacuole	62.26	64.61
PGSC0003DMT400057649	Potato	vacuole	61.88	64.21
EES11665	Sorghum	extracellular, vacuole	59.0	60.87
TraesCS2A01G587900.1	Wheat	endoplasmic reticulum	58.81	60.79
TraesCS2B01G595300.1	Wheat	endoplasmic reticulum, extracellular	58.62	60.59
TraesCS2D01G565300.1	Wheat	endoplasmic reticulum, extracellular	58.43	60.4
Zm00001d026635_P002	Maize	endoplasmic reticulum, extracellular, vacuole	59.2	58.75
GSMUA_AchrUn_...	Banana	extracellular	49.81	55.91
Os04t0680400-01	Rice	endoplasmic reticulum, extracellular	32.76	54.11
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plastid	12.45	42.21
KRH14595	Soybean	endoplasmic reticulum	20.11	19.96
KRH73532	Soybean	endoplasmic reticulum	19.73	19.58
KRH10574	Soybean	endoplasmic reticulum	19.54	19.47
KRH43883	Soybean	endoplasmic reticulum	17.82	18.02

Protein Annotations

KEGG:00230+3.5.2.5	Gene3D:3.20.20.140	MapMan:6.1.4.8	UniProt:A0A0R0FXA5	EMBL:ACUP02009162	InterPro:Allantoinase
InterPro:Amidohydro-rel	EnsemblPlantsGene:GLYMA_15G073000	GO:GO:0000256	GO:GO:0003674	GO:GO:0003824	GO:GO:0004038
GO:GO:0005488	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016810	GO:GO:0050897
InterPro:IPR011059	EnsemblPlants:KRH10854	ProteinID:KRH10854	ProteinID:KRH10854.1	InterPro:Metal-dep_hydrolase_composite	InterPro:Metal_Hydrolase
PFAM:PF01979	PANTHER:PTHR43668	PANTHER:PTHR43668:SF2	MetaCyc:PWY-5697	MetaCyc:PWY-5698	SUPFAM:SSF51338
SUPFAM:SSF51556	TIGRFAMs:TIGR03178	TMHMM:TMhelix	UniParc:UPI0006ED775D	:	:

Description

hypothetical protein

Coordinates

chr15:+:5596096..5602661

Molecular Weight (calculated)

57612.6 Da

IEP (calculated)

8.193

GRAVY (calculated)

-0.128

Length

522 amino acids

Sequence
(BLAST)

001: MEHFVWRVLP LLTILISLVV FFYLQDSYRA HLHPLVKFPR NKCSLLPHRH FWITSKRIVT PQGIISGSVN SFICGPLTVE INEGKIISVI EGYSKQGKSK
101: QEKIIDYGDA VVMPGLIDVH VHLDEPGRTA WEGFDTGTRA ASAGGVTTVV DMPLNNHPTT VSKETLKLKL EAAENKIYVD VGFWGGLIPE NAHNTSILEG
201: LLSAGVLGLK SFMCSSGISD FPLTTIHHIK EGLSVLAKYR RPLLVHSEIQ QHSKKHLELN DKGGPRAYLT YLHTRPPSWE EAAIKELVGV TKDTRKGGPL
301: EGAHVHIVHL SDSSASLDLI KEAKSRGDSI SVETCPHYLA FSSEEIPNGD TRFKCSPPIR DAYNREKLWG AVLEGHIDLL SSDHSPTVPQ LKLLEEGDFL
401: KAWGGVTSLQ FDLPVTWSYG KKHGLTLEQL SLLWSKKPAT LAGLESKGAI AVGNHADIVV WKPEVEFDLN EDYPVFLKHP SLSAYMGRRL SGKVLETFVR
501: GNLVFKKGKH AHAACGVPIL AK

Best Arabidopsis Sequence Match ( AT4G04955.1 )
(BLAST)

001: MERTLLQWRL LPLLALIVAL FSFFFASPRS LQGNNKCSLL PHDHYWISSK RIVTPNGLIS GSVEVKGGII VSVVKEVDWH KSQRSRVKVI DYGEAVLMPG
101: LIDVHVHLDD PGRSEWEGFP SGTKAAAAGG ITTLVDMPLN SFPSTVSPET LKLKIEAAKN RIHVDVGFWG GLVPDNALNS SALESLLDAG VLGLKSFMCP
201: SGINDFPMTN ITHIKEGLSV LAKYKRPLLV HAEIERDLEI EDGSENDPRS YLTYLKTRPT SWEEGAIRNL LSVTENTRIG GSAEGAHLHI VHLSDASSSL
301: DLIKEAKGKG DSVTVETCPH YLAFSAEEIP EGDTRFKCSP PIRDAANREK LWEALMEGDI DMLSSDHSPT KPELKLMSDG NFLKAWGGIS SLQFVLPITW
401: SYGKKYGVTL EQVTSWWSDR PSKLAGLHSK GAVTVGKHAD LVVWEPEAEF DVDEDHPIHF KHPSISAYLG RRLSGKVVST FVRGNLVFGE GKHASDACGS
501: LQLATT

Arabidopsis Description

ALNAllantoinase [Source:UniProtKB/Swiss-Prot;Acc:Q94AP0]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.