Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 7
- nucleus 2
- mitochondrion 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH73738 | Soybean | nucleus | 95.49 | 95.49 |
KRH46170 | Soybean | nucleus | 64.29 | 84.24 |
VIT_16s0013g00620.t01 | Wine grape | nucleus | 63.91 | 82.52 |
GSMUA_Achr11P... | Banana | cytosol | 60.15 | 78.43 |
PGSC0003DMT400054153 | Potato | cytosol | 59.02 | 76.96 |
HORVU1Hr1G055520.1 | Barley | cytosol | 56.39 | 76.53 |
GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 58.27 | 76.35 |
CDX81054 | Canola | cytosol | 22.56 | 75.95 |
KRG98772 | Soybean | cytosol, plastid | 75.19 | 74.91 |
AT5G07470.1 | Thale cress | cytosol | 56.77 | 74.75 |
Bra005938.1-P | Field mustard | cytosol | 51.5 | 74.46 |
Bra005937.1-P | Field mustard | cytosol | 51.13 | 73.91 |
CDY67000 | Canola | cytosol | 51.13 | 73.91 |
CDX78294 | Canola | cytosol | 51.13 | 73.91 |
CDX78295 | Canola | cytosol | 51.13 | 73.91 |
CDX81055 | Canola | cytosol | 51.13 | 73.91 |
CDX81056 | Canola | cytosol | 51.13 | 73.91 |
Bra005939.1-P | Field mustard | cytosol | 51.13 | 73.51 |
Bra005940.1-P | Field mustard | cytosol | 50.75 | 73.37 |
CDX81053 | Canola | cytosol, nucleus, plastid | 50.75 | 73.37 |
CDX81057 | Canola | cytosol | 50.75 | 73.37 |
CDX70042 | Canola | cytosol | 54.51 | 71.78 |
Bra009260.1-P | Field mustard | cytosol | 54.14 | 71.29 |
CDY65236 | Canola | nucleus | 53.76 | 70.79 |
Bra012934.1-P | Field mustard | cytosol | 33.46 | 68.46 |
Solyc06g034020.2.1 | Tomato | plastid | 60.15 | 67.51 |
CDY65235 | Canola | nucleus | 51.5 | 67.16 |
PGSC0003DMT400055589 | Potato | nucleus | 59.02 | 67.09 |
Bra009261.1-P | Field mustard | nucleus | 51.13 | 66.67 |
CDX70041 | Canola | nucleus | 51.13 | 66.67 |
AT5G07460.1 | Thale cress | cytosol | 53.76 | 65.6 |
Solyc03g093690.2.1 | Tomato | plastid | 62.41 | 64.59 |
AT5G61640.2 | Thale cress | plasma membrane | 55.26 | 64.19 |
Zm00001d029965_P001 | Maize | plastid | 62.41 | 64.09 |
KRH63671 | Soybean | cytosol | 46.24 | 63.4 |
Bra040258.1-P | Field mustard | nucleus | 12.78 | 62.96 |
EER94474 | Sorghum | plastid | 60.15 | 62.75 |
CDX78293 | Canola | nucleus | 51.88 | 62.44 |
CDX81052 | Canola | cytosol, mitochondrion, nucleus | 51.13 | 61.54 |
TraesCS1D01G219100.1 | Wheat | plastid | 60.15 | 61.3 |
Os10t0563600-01 | Rice | plastid | 60.15 | 60.84 |
TraesCS1A01G217300.1 | Wheat | golgi, plastid | 59.02 | 60.15 |
TraesCS1B01G230500.1 | Wheat | plastid | 59.4 | 60.08 |
GSMUA_Achr5P18310_001 | Banana | golgi, mitochondrion, plastid | 59.02 | 56.68 |
CDY23047 | Canola | endoplasmic reticulum, extracellular | 42.11 | 56.0 |
CDY02125 | Canola | nucleus | 42.86 | 55.88 |
CDY41436 | Canola | cytosol, nucleus, plastid | 15.79 | 55.26 |
Bra016336.1-P | Field mustard | cytosol, nucleus, plastid | 15.79 | 55.26 |
Bra005936.1-P | Field mustard | cytosol | 51.88 | 52.47 |
KRH08095 | Soybean | endoplasmic reticulum | 26.69 | 28.4 |
KRH69798 | Soybean | endoplasmic reticulum | 26.32 | 28.0 |
Protein Annotations
EntrezGene:100804748 | Gene3D:3.30.1060.10 | MapMan:50.1.8 | EMBL:ACUP02008501 | EnsemblPlantsGene:GLYMA_14G023900 | GO:GO:0003674 |
GO:GO:0003824 | GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | UniProt:I1M6R8 |
InterPro:IPR036509 | EnsemblPlants:KRH14408 | ProteinID:KRH14408 | ProteinID:KRH14408.1 | ProteinID:KRH14409.1 | HAMAP:MF_01401 |
InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | PFAM:PF01625 | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF4 | SUPFAM:SSF55068 |
TIGRFAMs:TIGR00401 | UniParc:UPI00023D4537 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr14:+:1708408..1710870
Molecular Weight (calculated)
29693.0 Da
IEP (calculated)
8.624
GRAVY (calculated)
-0.524
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLKCLAAIS SSYTTTSNSL LVFASSSLSS PAKTKFLPSL SRFSVKRLCF LSQTRPHISV NKPSMNLLNR LGFGSARAPE NMDSSIPQGP DDDIPAPGQQ
101: FAEFGAGCFW GVELAFQRVP GVTKTEVGYT QGLVHNPTYE DVCTGTTNHS EVVRVQYDPK ICSYETLLDV FWARHDPTTL NRQGNDVGTQ YRSGIYYYTP
201: EQEKAAKESL EQQQKQLNRK IVTEILPAKK FYRAEEYHQQ YLEKGGRSGF KQSASKGCND PIRCYG
101: FAEFGAGCFW GVELAFQRVP GVTKTEVGYT QGLVHNPTYE DVCTGTTNHS EVVRVQYDPK ICSYETLLDV FWARHDPTTL NRQGNDVGTQ YRSGIYYYTP
201: EQEKAAKESL EQQQKQLNRK IVTEILPAKK FYRAEEYHQQ YLEKGGRSGF KQSASKGCND PIRCYG
001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
Arabidopsis Description
MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.