Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016336.1-P | Field mustard | cytosol, nucleus, plastid | 100.0 | 100.0 |
| CDX70041 | Canola | nucleus | 69.74 | 25.98 |
| CDY65235 | Canola | nucleus | 69.74 | 25.98 |
| CDX78293 | Canola | nucleus | 63.16 | 21.72 |
| CDX81052 | Canola | cytosol, mitochondrion, nucleus | 63.16 | 21.72 |
| AT5G07460.1 | Thale cress | cytosol | 59.21 | 20.64 |
| KRH46170 | Soybean | nucleus | 53.95 | 20.2 |
| CDX78295 | Canola | cytosol | 43.42 | 17.93 |
| CDX81056 | Canola | cytosol | 43.42 | 17.93 |
| CDX81057 | Canola | cytosol | 43.42 | 17.93 |
| CDY67000 | Canola | cytosol | 43.42 | 17.93 |
| CDY23047 | Canola | endoplasmic reticulum, extracellular | 46.05 | 17.5 |
| CDX81053 | Canola | cytosol, nucleus, plastid | 42.11 | 17.39 |
| CDX81055 | Canola | cytosol | 42.11 | 17.39 |
| CDX78294 | Canola | cytosol | 42.11 | 17.39 |
| CDY65236 | Canola | nucleus | 46.05 | 17.33 |
| CDX70042 | Canola | cytosol | 46.05 | 17.33 |
| CDY02125 | Canola | nucleus | 43.42 | 16.18 |
| KRH14408 | Soybean | nucleus | 55.26 | 15.79 |
| CDY11057 | Canola | plastid | 52.63 | 15.75 |
| CDX92678 | Canola | plastid | 52.63 | 15.75 |
| KRG98772 | Soybean | cytosol, plastid | 55.26 | 15.73 |
| KRH73738 | Soybean | nucleus | 53.95 | 15.41 |
| CDY34344 | Canola | plastid | 50.0 | 14.84 |
| CDY03378 | Canola | plastid | 50.0 | 14.84 |
| CDY30332 | Canola | vacuole | 22.37 | 6.8 |
| CDY54549 | Canola | vacuole | 22.37 | 6.8 |
| CDX81054 | Canola | cytosol | 3.95 | 3.8 |
Protein Annotations
| EnsemblPlants:CDY41436 | EnsemblPlantsGene:GSBRNA2T00073032001 | Gene3D:3.30.1060.10 | GO:A0A078HUM3 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:IPR036509 | InterPro:Met_Sox_Rdtase_MsrA |
| InterPro:Met_Sox_Rdtase_MsrA_sf | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF9 | PFAM:PF01625 | ProteinID:CDY41436 | ProteinID:CDY41436.1 |
| SUPFAM:SSF55068 | UniParc:UPI00025463D7 | UniProt:A0A078HUM3 | MapMan:50.1.8 | : | : |
Description
BnaA08g20380DBnaA08g20380D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUM3]
Coordinates
chrLK032498:+:23675..25692
Molecular Weight (calculated)
8472.2 Da
IEP (calculated)
10.149
GRAVY (calculated)
-0.782
Length
76 amino acids
Sequence
(BLAST)
(BLAST)
1: MHVVTVAEEP IAGAGSRLRW KNQQKNLEKK IVTEILPAKK FHKAEEYHQH YLSKGGKSGH AQSPSKSCKD PISCFG
001: MDSSLKTQEP QVVETSPSPV AQEPPQVADK PAIVPSPIAQ EPDNDVPAPG NEFAEFAAGC FWGVELAFQR IPGVTVTEVG YTHGISHNPS YEDVCTNTTN
101: HAEVVRVQYD PKECTYETLL DLFWSRHNPT TLNRQGELLG AQYRSGIYFY TPEQEKLARE SLEKEQKKLE DKIVTEILPA KKFYKAEEYH QQYLVKGGMH
201: GNAQSPAKSC KDPIRCYG
101: HAEVVRVQYD PKECTYETLL DLFWSRHNPT TLNRQGELLG AQYRSGIYFY TPEQEKLARE SLEKEQKKLE DKIVTEILPA KKFYKAEEYH QQYLVKGGMH
201: GNAQSPAKSC KDPIRCYG
Arabidopsis Description
MRSA2PMSR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.