Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 4
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037241.1-P | Field mustard | vacuole | 98.4 | 98.4 |
| CDY30332 | Canola | vacuole | 97.6 | 97.6 |
| AT2G18030.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 73.6 | 72.44 |
| Solyc02g084030.2.1 | Tomato | nucleus | 66.8 | 66.27 |
| KRH08095 | Soybean | endoplasmic reticulum | 63.6 | 63.6 |
| TraesCS7D01G074700.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 59.6 | 62.08 |
| KRH69798 | Soybean | endoplasmic reticulum | 61.6 | 61.6 |
| VIT_04s0023g03200.t01 | Wine grape | golgi | 62.0 | 61.51 |
| GSMUA_Achr1P08910_001 | Banana | endoplasmic reticulum, golgi | 60.4 | 60.89 |
| Zm00001d045418_P001 | Maize | mitochondrion | 58.8 | 60.25 |
| TraesCS7A01G081100.1 | Wheat | endoplasmic reticulum, golgi | 58.4 | 58.87 |
| EER89155 | Sorghum | endoplasmic reticulum, golgi | 58.4 | 58.17 |
| TraesCS4A01G378100.1 | Wheat | endoplasmic reticulum, golgi | 57.2 | 57.43 |
| PGSC0003DMT400009346 | Potato | endoplasmic reticulum | 63.6 | 57.19 |
| Os06t0138100-01 | Rice | golgi | 56.0 | 55.12 |
| HORVU7Hr1G018320.4 | Barley | plastid | 58.4 | 52.52 |
| CDX78295 | Canola | cytosol | 26.4 | 35.87 |
| CDX81054 | Canola | cytosol | 11.2 | 35.44 |
| CDX81056 | Canola | cytosol | 26.0 | 35.33 |
| CDX81055 | Canola | cytosol | 26.0 | 35.33 |
| CDX78294 | Canola | cytosol | 26.0 | 35.33 |
| CDY67000 | Canola | cytosol | 26.0 | 35.33 |
| CDX81057 | Canola | cytosol | 25.6 | 34.78 |
| CDX81053 | Canola | cytosol, nucleus, plastid | 25.6 | 34.78 |
| CDX70041 | Canola | nucleus | 26.8 | 32.84 |
| CDX70042 | Canola | cytosol | 26.4 | 32.67 |
| CDY65235 | Canola | nucleus | 26.4 | 32.35 |
| CDY65236 | Canola | nucleus | 26.0 | 32.18 |
| CDX78293 | Canola | nucleus | 27.2 | 30.77 |
| CDX81052 | Canola | cytosol, mitochondrion, nucleus | 26.8 | 30.32 |
| CDY23047 | Canola | endoplasmic reticulum, extracellular | 22.4 | 28.0 |
| CDY34344 | Canola | plastid | 27.2 | 26.56 |
| CDY03378 | Canola | plastid | 27.2 | 26.56 |
| CDY11057 | Canola | plastid | 26.4 | 25.98 |
| CDY02125 | Canola | nucleus | 21.2 | 25.98 |
| CDX92678 | Canola | plastid | 26.0 | 25.59 |
| CDY41436 | Canola | cytosol, nucleus, plastid | 6.8 | 22.37 |
Protein Annotations
| Gene3D:3.30.1060.10 | MapMan:50.1.8 | GO:A0A078IWW6 | UniProt:A0A078IWW6 | EnsemblPlants:CDY54549 | ProteinID:CDY54549 |
| ProteinID:CDY54549.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00014291001 | InterPro:IPR036509 | HAMAP:MF_01401 | InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf |
| PFAM:PF01625 | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF3 | SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 | TMHMM:TMhelix |
| UniParc:UPI0004EDFA58 | : | : | : | : | : |
Description
BnaCnng27260DBnaCnng27260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IWW6]
Coordinates
chrLK033329:-:20544..21693
Molecular Weight (calculated)
28185.6 Da
IEP (calculated)
8.199
GRAVY (calculated)
-0.305
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSQMTILS LSPFAILFLY ISLLDKTVSI RLSNQISDPV VDSPDRPLKS AVFALGSFWR SETAFGCING VVRTTAGYSG GTKVNPEYRK LGDHAESVQV
101: EYDPRVVGYR QLLDVFWSSH DSRQVFGQGP DVGNQYRSII FTNSTEELRL ATISKEREQL KSRSSIVTTQ IQQLGTFYRA EPDHQKFELK QHPFLLQLIG
201: NMAEEELERS ALATKLNGYA AELCPPRVQK QIDSRVNEII RKGWPVLKDI
101: EYDPRVVGYR QLLDVFWSSH DSRQVFGQGP DVGNQYRSII FTNSTEELRL ATISKEREQL KSRSSIVTTQ IQQLGTFYRA EPDHQKFELK QHPFLLQLIG
201: NMAEEELERS ALATKLNGYA AELCPPRVQK QIDSRVNEII RKGWPVLKDI
001: MAISLKRNRF FIPYTNLVFF FFLCVSLLDK TVSIRISNQI SDTVVDSPDR PLKSAVFALG SFWRSEAAFG CINGVVRTSA GYAGGTKTNP EYRNLGDHAE
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI
Arabidopsis Description
MSRA5Peptide methionine sulfoxide reductase A5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL43]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.