Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400009346 | Potato | endoplasmic reticulum | 83.73 | 75.9 |
| VIT_04s0023g03200.t01 | Wine grape | golgi | 69.05 | 69.05 |
| Bra037241.1-P | Field mustard | vacuole | 67.06 | 67.6 |
| CDY54549 | Canola | vacuole | 66.27 | 66.8 |
| KRH08095 | Soybean | endoplasmic reticulum | 65.87 | 66.4 |
| CDY30332 | Canola | vacuole | 65.87 | 66.4 |
| KRH69798 | Soybean | endoplasmic reticulum | 65.48 | 66.0 |
| AT2G18030.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 64.29 | 63.78 |
| TraesCS7D01G074700.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 60.32 | 63.33 |
| GSMUA_Achr1P08910_001 | Banana | endoplasmic reticulum, golgi | 61.9 | 62.9 |
| Zm00001d045418_P001 | Maize | mitochondrion | 59.92 | 61.89 |
| EER89155 | Sorghum | endoplasmic reticulum, golgi | 61.51 | 61.75 |
| TraesCS4A01G378100.1 | Wheat | endoplasmic reticulum, golgi | 60.32 | 61.04 |
| TraesCS7A01G081100.1 | Wheat | endoplasmic reticulum, golgi | 59.52 | 60.48 |
| Os06t0138100-01 | Rice | golgi | 59.92 | 59.45 |
| HORVU7Hr1G018320.4 | Barley | plastid | 60.32 | 54.68 |
| Solyc03g111720.2.1 | Tomato | extracellular, plastid | 24.6 | 31.63 |
| Solyc06g034020.2.1 | Tomato | plastid | 24.21 | 25.74 |
| Solyc03g093690.2.1 | Tomato | plastid | 25.4 | 24.9 |
| Solyc02g063250.2.1 | Tomato | cytosol | 24.6 | 23.57 |
Protein Annotations
| Gene3D:3.30.1060.10 | MapMan:50.1.8 | ProteinID:AEN03273.1 | UniProt:G3K2M5 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR036509 |
| HAMAP:MF_01401 | InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | PFAM:PF01625 | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF3 |
| SUPFAM:SSF55068 | EnsemblPlantsGene:Solyc02g084030.2 | EnsemblPlants:Solyc02g084030.2.1 | TIGRFAMs:TIGR00401 | TMHMM:TMhelix | UniParc:UPI000229035D |
| SEG:seg | : | : | : | : | : |
Description
Peptide methionine sulfoxide reductase A5 [Source:Projected from Arabidopsis thaliana (AT2G18030) UniProtKB/Swiss-Prot;Acc:Q9SL43]
Coordinates
chr2:+:47246575..47251710
Molecular Weight (calculated)
28581.0 Da
IEP (calculated)
8.071
GRAVY (calculated)
-0.347
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVAKSNYFF SHFCFHFLFT IILLALNPVL SIRFPDRIQE VPQDASNQPL QTAVFALGSF WRSEASFGCL NGIVRTTVGY SGGSKANPEY RNLGDHAESV
101: QVEYDPRVLG FRQLLEVFWS SHDSRQVFGQ GPDVGNQYRS IIFTSGTEES RLAAVSKERE QSKSKSSIVT TQIQQLEAFY PAEPEHQKFE LKRNPFLLQL
201: MGNLPEEELE RSTLATKLNG YAAELCPSRI QKRIDGKIND IIKKGWPILK EV
101: QVEYDPRVLG FRQLLEVFWS SHDSRQVFGQ GPDVGNQYRS IIFTSGTEES RLAAVSKERE QSKSKSSIVT TQIQQLEAFY PAEPEHQKFE LKRNPFLLQL
201: MGNLPEEELE RSTLATKLNG YAAELCPSRI QKRIDGKIND IIKKGWPILK EV
001: MAISLKRNRF FIPYTNLVFF FFLCVSLLDK TVSIRISNQI SDTVVDSPDR PLKSAVFALG SFWRSEAAFG CINGVVRTSA GYAGGTKTNP EYRNLGDHAE
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI
Arabidopsis Description
MSRA5Peptide methionine sulfoxide reductase A5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL43]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.