CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 6
plastid 3
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	mitochondrion, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045418_P001	Maize	mitochondrion	88.05	90.57
TraesCS7D01G074700.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	76.49	80.0
TraesCS7A01G081100.1	Wheat	endoplasmic reticulum, golgi	78.49	79.44
Os06t0138100-01	Rice	golgi	78.09	77.17
TraesCS4A01G378100.1	Wheat	endoplasmic reticulum, golgi	75.3	75.9
HORVU7Hr1G018320.4	Barley	plastid	75.7	68.35
GSMUA_Achr1P08910_001	Banana	endoplasmic reticulum, golgi	62.55	63.31
KRH08095	Soybean	endoplasmic reticulum	61.35	61.6
Solyc02g084030.2.1	Tomato	nucleus	61.75	61.51
KRH69798	Soybean	endoplasmic reticulum	60.16	60.4
VIT_04s0023g03200.t01	Wine grape	golgi	60.56	60.32
Bra037241.1-P	Field mustard	vacuole	58.57	58.8
CDY54549	Canola	vacuole	58.17	58.4
AT2G18030.1	Thale cress	endoplasmic reticulum, golgi, vacuole	58.96	58.27
CDY30332	Canola	vacuole	57.77	58.0
PGSC0003DMT400009346	Potato	endoplasmic reticulum	60.56	54.68
EES12389	Sorghum	cytosol	27.49	37.3
EES12392	Sorghum	cytosol, mitochondrion, peroxisome	26.29	34.55
EER94474	Sorghum	plastid	27.09	26.67

Protein Annotations

Gene3D:3.30.1060.10	MapMan:50.1.8	EntrezGene:8070702	UniProt:C5Z3R0	ncoils:Coil	EnsemblPlants:EER89155
ProteinID:EER89155	ProteinID:EER89155.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008113	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:IPR036509	HAMAP:MF_01401	InterPro:Met_Sox_Rdtase_MsrA	InterPro:Met_Sox_Rdtase_MsrA_sf
PFAM:PF01625	PANTHER:PTHR42799	PANTHER:PTHR42799:SF3	EnsemblPlantsGene:SORBI_3010G028400	SUPFAM:SSF55068	unigene:Sbi.6769
SignalP:SignalP-TM	TIGRFAMs:TIGR00401	TMHMM:TMhelix	UniParc:UPI0001A89AAD	RefSeq:XP_002437788.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:2315848..2317922

Molecular Weight (calculated)

27000.5 Da

IEP (calculated)

9.393

GRAVY (calculated)

-0.041

Length

251 amino acids

Sequence
(BLAST)

001: MAAPSAVAVA GVILIGVLVL LVAGVSGARL PGRGGAVRGA TALPRGGATA TAVFALGSFW RSEAAFGCLP GVIRTSVGYA GGSKANPEYR NLADHAECVK
101: VEYDPRLIHY RQLLDVFWAS HDPREVFGQG PDVGNQYRSV IFTNGTIEAR LAALSKEKEQ AKDRSSVITT QIQPLGVFHS AEPEHQKFEL KRKPFLLQLI
201: GNLPEEELLT STLAAKLNAY AAELCPANTQ KRINSKIDEV TKKGWPILRD I

Best Arabidopsis Sequence Match ( AT2G18030.1 )
(BLAST)

001: MAISLKRNRF FIPYTNLVFF FFLCVSLLDK TVSIRISNQI SDTVVDSPDR PLKSAVFALG SFWRSEAAFG CINGVVRTSA GYAGGTKTNP EYRNLGDHAE
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI

Arabidopsis Description

MSRA5Peptide methionine sulfoxide reductase A5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL43]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.