Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0482000-01 | Rice | plasma membrane | 75.39 | 77.01 |
| EES12389 | Sorghum | cytosol | 74.35 | 76.76 |
| Os04t0482100-00 | Rice | cytosol | 75.92 | 76.32 |
| TraesCS2A01G323300.1 | Wheat | cytosol | 69.11 | 72.93 |
| TraesCS2B01G359300.1 | Wheat | cytosol | 68.59 | 72.38 |
| TraesCS2D01G339600.1 | Wheat | cytosol | 68.59 | 72.38 |
| EER94474 | Sorghum | plastid | 60.21 | 45.1 |
| HORVU2Hr1G083170.1 | Barley | cytosol, plastid | 50.79 | 39.11 |
| EER89155 | Sorghum | endoplasmic reticulum, golgi | 34.55 | 26.29 |
Protein Annotations
| Gene3D:3.30.1060.10 | MapMan:50.1.8 | EntrezGene:8058738 | UniProt:C5YAU0 | EnsemblPlants:EES12392 | ProteinID:EES12392 |
| ProteinID:EES12392.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0055114 | InterPro:IPR036509 | HAMAP:MF_01401 | InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | PFAM:PF01625 |
| PANTHER:PTHR42799 | PANTHER:PTHR42799:SF8 | EnsemblPlantsGene:SORBI_3006G123500 | SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 | UniParc:UPI0001A870D4 |
| RefSeq:XP_002448064.1 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:48915680..48917326
Molecular Weight (calculated)
21046.5 Da
IEP (calculated)
5.057
GRAVY (calculated)
-0.561
Length
191 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSCSTAID GGAANPPAAL DLAPDTDAPA GDGLELAQFA AGCFWSVELT YQRLPGVART EVGYTQGHHQ APTYELVCGH GTGHAEAVRL HYDPKACPYT
101: TLLDVFWAKI NPTTLNRQGK DVGTQYRTGI YYYTAEQESL AEEQKKWEDK IVTEILPAKR FYPAEEYHQR YLEKGGQSAE KGCTEPMRCY G
101: TLLDVFWAKI NPTTLNRQGK DVGTQYRTGI YYYTAEQESL AEEQKKWEDK IVTEILPAKR FYPAEEYHQR YLEKGGQSAE KGCTEPMRCY G
001: MDSSLKTQEP QVVETSPSPV AQEPPQVADK PAIVPSPIAQ EPDNDVPAPG NEFAEFAAGC FWGVELAFQR IPGVTVTEVG YTHGISHNPS YEDVCTNTTN
101: HAEVVRVQYD PKECTYETLL DLFWSRHNPT TLNRQGELLG AQYRSGIYFY TPEQEKLARE SLEKEQKKLE DKIVTEILPA KKFYKAEEYH QQYLVKGGMH
201: GNAQSPAKSC KDPIRCYG
101: HAEVVRVQYD PKECTYETLL DLFWSRHNPT TLNRQGELLG AQYRSGIYFY TPEQEKLARE SLEKEQKKLE DKIVTEILPA KKFYKAEEYH QQYLVKGGMH
201: GNAQSPAKSC KDPIRCYG
Arabidopsis Description
MRSA2PMSR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBC0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.