Factsheet for Os04t0482000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12389	Sorghum	cytosol	85.56	86.49
Zm00001d003271_P001	Maize	cytosol, extracellular	85.56	86.49
TraesCS2A01G323300.1	Wheat	cytosol	82.89	85.64
TraesCS2B01G359300.1	Wheat	cytosol	82.35	85.08
TraesCS2D01G339600.1	Wheat	cytosol	81.82	84.53
Os04t0482100-00	Rice	cytosol	83.96	82.63
EES12392	Sorghum	cytosol, mitochondrion, peroxisome	77.01	75.39
Os10t0563600-01	Rice	plastid	67.38	47.91
HORVU2Hr1G083170.1	Barley	cytosol, plastid	61.5	46.37
Os06t0138100-01	Rice	golgi	36.36	26.77

Protein Annotations

Gene3D:3.30.1060.10	EntrezGene:4336192	MapMan:50.1.8	EMBL:AK064801	ProteinID:BAF15030.1	ProteinID:BAS89754.1
ProteinID:CAD41099.2	ncoils:Coil	ProteinID:EAZ31123.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0008113	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPR036509	HAMAP:MF_01401	InterPro:Met_Sox_Rdtase_MsrA
InterPro:Met_Sox_Rdtase_MsrA_sf	EnsemblPlantsGene:Os04g0482000	EnsemblPlants:Os04t0482000-01	PFAM:PF01625	PANTHER:PTHR42799	PANTHER:PTHR42799:SF8
UniProt:Q7XUP7	SUPFAM:SSF55068	TIGRFAMs:TIGR00401	UniParc:UPI00001B0CFB	RefSeq:XP_015637285.1	SEG:seg

Description

Methionine sulfoxide reductase A2.1Similar to Peptide methionine sulfoxide reductase. (Os04t0482000-01)

Coordinates

chr4:-:24103028..24104868

Molecular Weight (calculated)

20808.1 Da

IEP (calculated)

6.239

GRAVY (calculated)

-0.731

Length

187 amino acids

Sequence
(BLAST)

001: MSDSNPGAAN PALGPDADAA AGEGLELAQF AAGCFWSVEL TYQRLPGVAR TEVGYSQGHR HEPTYRDVCG GGTGHAEVVR VHYDPKACPY EVLLDVFWAK
101: HNPTTLNRQG NDVGTQYRSG IYYYTAEQEK AARDSLAEKQ KEWKERIVTE ILPATRFYPA EEYHQRYLEK GGQSAKKSCN DPIRCYG

Best Arabidopsis Sequence Match ( AT4G25130.1 )
(BLAST)

001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG

Arabidopsis Description

MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.