Factsheet for Os10t0563600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 2
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plastid: 19415325

plastid: 17189339
plastid: 27992503

gfp PMID: 19415325 doi

X Guo, Y Wu, Y Wang, Y Chen, C Chu

State Key Laboratory of Plant Genomics, National Centre for Plant Gene Research (Beijing), Institute of Genetics and Developmental Biology, Chinese Academy of Sciences (CAS), 100101 Beijing, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 17189339 doi

T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky

Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G055520.1	Barley	cytosol	61.6	82.65
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	62.36	80.79
GSMUA_Achr11P...	Banana	cytosol	61.6	79.41
VIT_16s0013g00620.t01	Wine grape	nucleus	60.08	76.7
EER94474	Sorghum	plastid	73.38	75.69
PGSC0003DMT400054153	Potato	cytosol	58.56	75.49
KRH46170	Soybean	nucleus	56.65	73.4
TraesCS1D01G219100.1	Wheat	plastid	72.62	73.18
TraesCS1A01G217300.1	Wheat	golgi, plastid	72.24	72.8
TraesCS1B01G230500.1	Wheat	plastid	71.86	71.86
Zm00001d029965_P001	Maize	plastid	70.72	71.81
Os04t0482000-01	Rice	plasma membrane	47.91	67.38
Os04t0482100-00	Rice	cytosol	45.63	63.16
Solyc03g093690.2.1	Tomato	plastid	61.22	62.65
Solyc06g034020.2.1	Tomato	plastid	55.89	62.03
PGSC0003DMT400055589	Potato	nucleus	54.75	61.54
CDX92678	Canola	plastid	58.56	60.63
KRH14408	Soybean	nucleus	60.84	60.15
Bra019187.1-P	Field mustard	plastid	57.79	59.84
CDY11057	Canola	plastid	57.03	59.06
KRH73738	Soybean	nucleus	59.7	59.02
CDY03378	Canola	plastid	57.41	58.98
Bra013865.1-P	Field mustard	plastid	57.03	58.59
CDY34344	Canola	plastid	57.03	58.59
AT4G25130.1	Thale cress	plastid	57.41	58.53
KRG98772	Soybean	cytosol, plastid	57.41	56.55
GSMUA_Achr5P18310_001	Banana	golgi, mitochondrion, plastid	59.32	56.32
Os06t0138100-01	Rice	golgi	25.48	26.38

Protein Annotations

Gene3D:3.30.1060.10	EntrezGene:4349402	MapMan:50.1.8	ProteinID:ABB47990.2	ProteinID:ABB47991.2	EMBL:AK067167
EMBL:AK109715	ProteinID:BAF27240.1	ProteinID:BAT12084.1	ProteinID:BAT12085.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950
GO:GO:0006979	GO:GO:0008113	GO:GO:0008150	GO:GO:0008152	GO:GO:0009416	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009735
GO:GO:0009941	GO:GO:0009987	GO:GO:0016491	GO:GO:0034599	GO:GO:0055114	InterPro:IPR036509
HAMAP:MF_01401	InterPro:Met_Sox_Rdtase_MsrA	InterPro:Met_Sox_Rdtase_MsrA_sf	EnsemblPlantsGene:Os10g0563600	EnsemblPlants:Os10t0563600-01	PFAM:PF01625
PANTHER:PTHR42799	PANTHER:PTHR42799:SF4	UniProt:Q336R9	SUPFAM:SSF55068	TIGRFAMs:TIGR00401	UniParc:UPI00005E1FA8
RefSeq:XP_015614143.1	SEG:seg	:	:	:	:

Description

Methionine sulfoxide reductase A4, Methionine sulfoxide reductase A4.1Similar to Peptide methionine sulfoxide reductase (EC 1.8.4.6) (Protein- methionine-S-oxide reductase) (Peptide Met(O) reductase). (Os10t0563600-01);Similar to peptide methionine sulfoxide reductase. (Os10t0563600-02)

Coordinates

chr10:+:22254783..22257075

Molecular Weight (calculated)

28640.6 Da

IEP (calculated)

8.460

GRAVY (calculated)

-0.494

Length

263 amino acids

Sequence
(BLAST)

001: MPPLLASTSS TSPLLLASRL RGGGGCGCGG APLLHRTRRG FLAPSTTTTQ TTRTSFAAMS WLGKLGLGGL GGSPRASAAS AALAQGPDED RPAAGNEFAQ
101: FGAGCFWGVE LAFQRVPGVT RTEVGYSQGN LHDPTYEDVC TGATYHNEVV RVHYDVSACK FDDLLDVFWA RHDPTTPNRQ GNDVGTQYRS GIYYYTPEQE
201: KAARESLEKQ QKLLNRTIVT EILPAKRFYR AEEYHQQYLA KGGRFGFRQS AEKGCNDPIR CYG

Best Arabidopsis Sequence Match ( AT4G25130.1 )
(BLAST)

001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG

Arabidopsis Description

MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.